RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 VN1R17PQ8TDU5 208 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DIS3LQ8TF46 1054 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CHURC1Q8WUH1 139 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 HNRNPLLQ8WVV9 542 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZDHHC19Q8WVZ1 309 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 IPCEF1Q8WWN9 437 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SREK1Q8WXA9 508 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MRGPRX1Q96LB2 322 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 C10orf90Q96M02 699 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF570Q96NI8 536 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC2A13Q96QE2 648 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SPAG5Q96R06 1193 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TAAR6Q96RI8 345 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MCCC1Q96RQ3 725 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS6KC1Q96S38 1066 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CCNL2Q96S94 520 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CCT8L2Q96SF2 557 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PKMYT1Q99640 499 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXC2Q99958 501 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ELAC2Q9BQ52 826 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLX1AQ9BQ83 275 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PAAF1Q9BRP4 392 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NUDT22Q9BRQ3 303 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TEKT3Q9BXF9 490 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM54Q9BYV2 358 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DPH1Q9BZG8 443 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 STRADBQ9C0K7 418 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM39BQ9GZU3 492 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NYXQ9GZU5 481 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF350Q9GZX5 532 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBP1Q9H171 429 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ACBD3Q9H3P7 528 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF430Q9H8G1 570 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SP140LQ9H930 580 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF287Q9HBT7 754 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ADGRL4Q9HBW9 690 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NGBQ9NPG2 151 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ESM1Q9NQ30 184 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DAZ3Q9NR90 486 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OLFML3Q9NRN5 406 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NLE1Q9NVX2 485 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BEX4Q9NWD9 120 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PIH1D1Q9NWS0 290 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 STK32BQ9NY57 414 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NLGN3Q9NZ94 848 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SENP1Q9P0U3 644 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 KIF17Q9P2E2 1029 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 UPB1Q9UBR1 384 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RGS17Q9UGC6 210 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NDRG3Q9UGV2 375 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BAIAP2L1Q9UHR4 511 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXL2Q9UKC9 423 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 RCOR1Q9UKL0 485 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF215Q9UL58 517 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CCPG1Q9ULG6 757 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SATB2Q9UPW6 733 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SCML2Q9UQR0 700 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CNPY2Q9Y2B0 182 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CA5BQ9Y2D0 317 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 MSRB2Q9Y3D2 182 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 OR10H1Q9Y4A9 318 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PPIAL4AQ9Y536 164 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PCDHGB2Q9Y5G2 931 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 LIPGQ9Y5X9 500 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ETV7Q9Y603 341 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SOX21Q9Y651 276 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 COPG1Q9Y678 874 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 POMT1Q9Y6A1 747 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SLCO1B1Q9Y6L6 691 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 ACANP16112 2415 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 CHD6Q8TD26 2715 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 PTPN13Q12923 2485 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 BRWD3Q6RI45 1802 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 GON4LQ3T8J9 2241 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 SDK1Q7Z5N4 2213 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 DIDO1Q9BTC0 2240 aaKnown RBP-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 HECTD1Q9ULT8 2610 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 NBPF19A0A087WUL8 3843 aa-0.41□□□□□ -2.48
TRAJ28-201ENST00000390509 EP300Q09472 2414 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ROS1P08922 2347 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DSPP15924 2871 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PARD3Q8TEW0 1356 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TGP01266 2768 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3DA0A087WVF3 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3IA0A087WXS9 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3EA0A087X179 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3KA0A087X1G2 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV3-20A0A0C4DH32 117 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A0U1RQG5 324 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MACROD2A1Z1Q3 448 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C19orf71A6NCJ1 209 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM43BA6NCK2 446 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR6C68A6NDL8 312 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3BA6NDS4 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3FA6NER0 549 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR2W5A6NFC9 320 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SDHAF1A6NFY7 115 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF860A6NHJ4 632 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SIGLEC16A6NMB1 481 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms