RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RPA4Q13156 261 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 RPS6KA1Q15418 735 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CTU2Q2VPK5 515 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 SIRPB2Q5JXA9 342 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 SLC35D3Q5M8T2 416 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 LYSMD4Q5XG99 296 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 OR4A47Q6IF82 309 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ALKBH5Q6P6C2 394 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CYB5D1Q6P9G0 228 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 KCTD9Q7L273 389 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 GPR141Q7Z602 305 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 NFE4Q86UQ8 179 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 MEX3DQ86XN8 651 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 PRSS35Q8N3Z0 413 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 MAB21L3Q8N8X9 362 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 MGARPQ8TDB4 240 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ZNF473Q8WTR7 871 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 SCARB1Q8WTV0 552 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 KRT35Q92764 455 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 SNX21Q969T3 373 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CFAP36Q96G28 342 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CDKN2AIPNLQ96HQ2 116 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ZNF479Q96JC4 524 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 GDAP1L1Q96MZ0 367 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ATP6V0BQ99437 205 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ATG101Q9BSB4 218 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 URM1Q9BTM9 101 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ACAT2Q9BWD1 397 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CDK19Q9BWU1 502 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 C1QTNF4Q9BXJ3 329 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 IDI2Q9BXS1 227 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 SLC2A11Q9BYW1 496 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 S1PR5Q9H228 398 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 UBQLN3Q9H347 655 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CPVLQ9H3G5 476 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 UPF2Q9HAU5 1272 aaKnown RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CHST11Q9NPF2 352 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 CWC25Q9NXE8 425 aaPredicted RBP2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 FLRT3Q9NZU0 649 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 HMG20BQ9P0W2 317 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 DAPK2Q9UIK4 370 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 MAN1B1Q9UKM7 699 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 ACAD8Q9UKU7 415 aa2.73□□□□□ -1.97
TRAJ40-201ENST00000390497 TRAV18A0A075B6X5 111 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 A0A0U1RQG5 324 aaPredicted RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 INO80B-WBP1J3KQ70 363 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CAPN9O14815 690 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 PGRMC2O15173 223 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ST8SIA3O43173 380 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SMAD6O43541 496 aaKnown RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 XPNPEP2O43895 674 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 PRKNO60260 465 aaPredicted RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ATP9AO75110 1047 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 PRDM1O75626 825 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 DDHD2O94830 711 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 APOHP02749 345 aaPredicted RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ATP1A1P05023 1023 aaKnown RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ANKRD34CP0C6C1 535 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 EPHA2P29317 976 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SFTPDP35247 375 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 PDLIM4P50479 330 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CDH11P55287 796 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 LINC00205P59089 165 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SLC34A1Q06495 639 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 DMPKQ09013 629 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ZNF415Q09FC8 603 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 RASGEF1BQ0VAM2 473 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 AP1B1Q10567 949 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 NONOQ15233 471 aaKnown RBP eCLIP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SGCBQ16585 318 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 TTC31Q49AM3 519 aaPredicted RBP2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 IQCCQ4KMZ1 466 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 AARDQ4LEZ3 155 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SLC39A12Q504Y0 691 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 FAM166AQ6J272 317 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 TATDN1Q6P1N9 297 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 TMEM270Q6UE05 265 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 FOXL2NBQ6ZUU3 175 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ARMC9Q7Z3E5 817 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CDK20Q8IZL9 346 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CCDC63Q8NA47 563 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 POC1AQ8NBT0 407 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 LPCAT1Q8NF37 534 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 DMBX1Q8NFW5 382 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 OR13A1Q8NGR1 328 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 OR52N5Q8NH56 324 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 GRHL3Q8TE85 626 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 SECTM1Q8WVN6 248 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CD101Q93033 1021 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 VOPP1Q96AW1 172 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 C5orf30Q96GV9 206 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 ST6GAL2Q96JF0 529 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 CDHR1Q96JP9 859 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 FAM20AQ96MK3 541 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 GAL3ST4Q96RP7 486 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 MAP3K3Q99759 626 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 NACAP1Q9BZK3 213 aa2.72□□□□□ -1.97
TRAJ40-201ENST00000390497 NAPBQ9H115 298 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms