RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZDHHC21Q8IVQ6 265 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 LHFPL5Q8TAF8 219 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC2A13Q96QE2 648 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 KCNN2Q9H2S1 579 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FAM83DQ9H4H8 585 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 SMURF1Q9HCE7 757 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 COQ3Q9NZJ6 369 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FBXW11Q9UKB1 542 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 CRYL1Q9Y2S2 319 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 E9PQ18 207 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 STX7O15400 261 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 EPN2O95208 641 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 GNPDA1P46926 289 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FLT3LGP49771 235 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 NDUFV1P49821 464 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 NOGQ13253 232 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 KIAA0040Q15053 153 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 ZBTB6Q15916 424 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF549Q6P9A3 640 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 PAMR1Q6UXH9 720 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 MSRB3Q8IXL7 192 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 MRGPRX2Q96LB1 330 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 C1orf74Q96LT6 269 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 RAD9AQ99638 391 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 FSD1LQ9BXM9 530 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 SRRQ9GZT4 340 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 TFB2MQ9H5Q4 396 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 RNF121Q9H920 327 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 UCKL1Q9NWZ5 548 aa14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 MARCH4Q9P2E8 410 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-201ENST00000389386 LINC00862A6NCI5 91 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 E5RI56 91 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 RPS17P08708 135 aaKnown RBP14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 PRKACAP17612 351 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 CHMP24386 653 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 AZGP1P25311 298 aaKnown RBP14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 PRKCZQ05513 592 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 SCN1BQ07699 218 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 GTF2H3Q13889 308 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 CRYBG2Q8N1P7 616 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 FBXO39Q8N4B4 442 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 GGHQ92820 318 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 METTL2AQ96IZ6 378 aaKnown RBP14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 PLCXD1Q9NUJ7 323 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC23A1Q9UHI7 598 aa14.27□□□□□ -0.12
VPS9D1-201ENST00000389386 RRN3P2A6NIE6 340 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 SUPT3HB4E1H0 165 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 DFFAO00273 331 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 SLC9A3R1O14745 358 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 HOXB6P17509 224 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 ATF4P18848 351 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 ARHGDIAP52565 204 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 STK11Q15831 433 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 PTCHD3Q3KNS1 767 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 FBXO47Q5MNV8 452 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 OR2T5Q6IEZ7 315 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 P3H2Q8IVL5 708 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 OR2T29Q8NH02 315 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 GPR151Q8TDV0 419 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 COQ8BQ96D53 544 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 ABCG2Q9UNQ0 655 aa14.27□□□□□ -0.13
VPS9D1-201ENST00000389386 MYADML2A6NDP7 307 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ATP6V1G2-DDX39BF2Z307 99 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CCL22O00626 93 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ERN1O75460 977 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 PTHP01270 115 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ELNP15502 786 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 PSEN2P49810 448 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 MLLT6P55198 1093 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 NPRL3Q12980 569 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 MFSD13AQ14CX5 517 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TOR1AIP1Q5JTV8 583 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 MLIPQ5VWP3 458 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TMPRSS11AQ6ZMR5 421 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CTU1Q7Z7A3 348 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 DNAJC22Q8N4W6 341 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 OR6P1Q8NGX9 317 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TRMT61AQ96FX7 289 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TRAF4Q9BUZ4 470 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 C11orf54Q9H0W9 315 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 KRT84Q9NSB2 600 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 PDP1Q9P0J1 537 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 HSPB11Q9Y547 144 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TIMM13Q9Y5L4 95 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 AUP1Q9Y679 476 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TSC2P49815 1807 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 MYO1GB0I1T2 1018 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CD3EAPO15446 510 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 RGS5O15539 181 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CTSHP09668 335 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 ICAM2P13598 275 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 CCNCP24863 283 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 TP53BP2Q13625 1128 aa14.26□□□□□ -0.13
VPS9D1-201ENST00000389386 GNASQ5JWF2 1037 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms