RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF224Q9NZL3 707 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DUX4Q9UBX2 424 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 CD300AQ9UGN4 299 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 POU2F3Q9UKI9 436 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLC22A14Q9Y267 594 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 GPR45Q9Y5Y3 372 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 MEIS3P2A8K0S8 358 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 CLTBP09497 229 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 GADD45AP24522 165 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SNRPD1P62314 119 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 LRRC73Q5JTD7 316 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR5AK3PQ8NH89 298 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DNAJB8Q8NHS0 232 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLCO4A1Q96BD0 722 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DPH2Q9BQC3 489 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PAAF1Q9BRP4 392 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DDX60Q8IY21 1712 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ANKRD36CQ5JPF3 1778 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 UGT2B17O75795 530 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DHFRP00374 187 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 IFNGR2P38484 337 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ASMTP46597 345 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 EPHB3P54753 998 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 FBXO43Q4G163 708 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 DESI1Q6ICB0 168 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PSAPL1Q6NUJ1 521 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 TBC1D19Q8N5T2 526 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 C11orf24Q96F05 449 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ALPK1Q96QP1 1244 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PKP4Q99569 1192 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 CCSER2Q9H7U1 834 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 ANKRA2Q9H9E1 313 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 PCTPQ9UKL6 214 aa12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 INTS6Q9UL03 887 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-201ENST00000389328 HAS3O00219 553 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SAP18O00422 153 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 UBFD1O14562 309 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 ERAL1O75616 437 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CDH4P55283 916 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SMIM11AP58511 58 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 TEAD4Q15561 434 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 RNF180Q86T96 592 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 TEX47Q8TBZ9 253 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 TP63Q9H3D4 680 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 TAS2R9Q9NYW1 312 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 RHCGQ9UBD6 479 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SERPINB7O75635 380 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CDRT1O95170 752 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SOX14O95416 240 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 LRG1P02750 347 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 BCKDHAP12694 445 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CD72P21854 359 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 ACLYP53396 1101 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 NPRL3Q12980 569 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 C9orf131Q5VYM1 1079 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCTD11Q693B1 232 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 DCP2Q8IU60 420 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 MED28Q9H204 178 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 POPDC3Q9HBV1 291 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 GKN1Q9NS71 199 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 MS4A12Q9NXJ0 267 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 GSRP00390 522 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 OR1D2P34982 312 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 ARCN1P48444 511 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SELPLGQ14242 412 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 GPAT3Q53EU6 434 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 PM20D1Q6GTS8 502 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 LETMD1Q6P1Q0 360 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SPRED1Q7Z699 444 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCNJ9Q92806 393 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 GPN2Q9H9Y4 310 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZBTB20Q9HC78 741 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CCDC177Q9NQR7 707 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 RUVBL1Q9Y265 456 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 LAMB1P07942 1786 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 A0A1B0GVM2 712 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 SLITRK5O94991 958 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 DNTTP04053 509 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CCNYL3P0C7X3 344 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 KCNC1P48547 511 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 CDKN1CP49918 316 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 ATP12AP54707 1039 aa12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-201ENST00000389328 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms