RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ORC3Q9UBD5 711 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 LNPEPQ9UIQ6 1025 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF541Q9H0D2 1346 aa1.86□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TRIM49BA6NDI0 452 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM221A6NGB7 291 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NPIPB9F8W1W9 429 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 NXPH4O95158 308 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KRT6AP02538 564 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KRT6BP04259 564 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 HAPLN1P10915 354 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CHMP24386 653 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TM4SF1P30408 202 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PTGER4P35408 488 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 GARSP41250 739 aaKnown RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KRT6CP48668 564 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KHKP50053 298 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 DNA2P51530 1060 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 DHODHQ02127 395 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZRSR2Q15696 482 aaKnown RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 UGT3A2Q3SY77 523 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FAM182AQ5T1J6 154 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KHDRBS2Q5VWX1 349 aaKnown RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ARHGAP22Q7Z5H3 698 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMPRSS11BQ86T26 416 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 RNF130Q86XS8 419 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 OR4N5Q8IXE1 308 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PIGBQ92521 554 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 USP6NLQ92738 828 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SERAC1Q96JX3 654 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CCDC3Q9BQI4 270 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SLC26A6Q9BXS9 759 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 IRAK4Q9NWZ3 460 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PLCL2Q9UPR0 1127 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PA2G4Q9UQ80 394 aaKnown RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMED3Q9Y3Q3 217 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 R4GN57 208 aa1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TDRD9Q8NDG6 1382 aaKnown RBP1.85□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ARPC2O15144 300 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PAPSS1O43252 624 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SCGB1D1O95968 90 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF19P17023 458 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 OR3A2P47893 321 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ATP4BP51164 291 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ITGA7Q13683 1181 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZNF146Q15072 292 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PTPN14Q15678 1187 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 DHRS7BQ6IAN0 325 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 CCBE1Q6UXH8 406 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 PP632Q6XCG6 107 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 TMEM173Q86WV6 379 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ZC3H3Q8IXZ2 948 aaKnown RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 ADGRF2Q8IZF7 708 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 B3GALT6Q96L58 329 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 FTOQ9C0B1 505 aaKnown RBP eCLIP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 JPT2Q9H910 190 aa1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 SEC63Q9UGP8 760 aaKnown RBP1.84□□□□□ -2.11
RNU6-1040P-201ENST00000383974 A0A1W2PQ72 361 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 O00370 1275 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MEIS2O14770 477 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 OGTO15294 1046 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 ERAL1O75616 437 aaKnown RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 KRT33AO76009 404 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 THY1P04216 161 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 FDPSP14324 419 aaKnown RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 AOC1P19801 751 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MAPK4P31152 587 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 SLC15A1P46059 708 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 PNLIPRP2P54317 469 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 SETQ01105 290 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MYL7Q01449 175 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 G3BP1Q13283 466 aaKnown RBP eCLIP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MAMLD1Q13495 774 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 IRF3Q14653 427 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 PHKG1Q16816 387 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 RNASEH2BQ5TBB1 312 aaKnown RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 C11orf63Q6NUN7 778 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 C3P1Q6ZMU1 363 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 THAP8Q8NA92 274 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 OR7A2PQ8NGA2 310 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 OR10G7Q8NGN6 311 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MRAPQ8TCY5 172 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 UCMAQ8WVF2 138 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 NSMAFQ92636 917 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 SAT2Q96F10 170 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 CCDC34Q96HJ3 373 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 UBAC1Q9BSL1 405 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 MTMR12Q9C0I1 747 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 TLE6Q9H808 572 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 C9orf78Q9NZ63 289 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 AASSQ9UDR5 926 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 PGAP2Q9UHJ9 254 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 NTNG1Q9Y2I2 539 aa1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 ZNF644Q9H582 1327 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1040P-201ENST00000383974 RUSC2Q8N2Y8 1516 aa1.82□□□□□ -2.12
RNU6-1040P-201ENST00000383974 IGHV3-38A0A0C4DH36 116 aa1.82□□□□□ -2.12
RNU6-1040P-201ENST00000383974 TRBV4-1A0A0J9YWV2 114 aa1.82□□□□□ -2.12
RNU6-1040P-201ENST00000383974 TRBV5-5A0A0J9YX44 114 aa1.82□□□□□ -2.12
RNU6-1040P-201ENST00000383974 FAM220BPB1ANY3 271 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms