RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PPFIBP2Q8ND30 876 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 ZNF669Q96BR6 464 aaPredicted RBP13.53□□□□□ -0.24
SHOX-202ENST00000381575 C10orf90Q96M02 699 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 FBXO6Q9NRD1 293 aaPredicted RBP13.53□□□□□ -0.24
SHOX-202ENST00000381575 C5AR2Q9P296 337 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 NTNG1Q9Y2I2 539 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 HYKKA2RU49 373 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 E5RI56 91 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 MATN4O95460 622 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 KRT14P02533 472 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 CD63P08962 238 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 CCNFP41002 786 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.25
SHOX-202ENST00000381575 RBBP7Q16576 425 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 RNF187Q5TA31 235 aaPredicted RBP13.52□□□□□ -0.25
SHOX-202ENST00000381575 PRAMEF13Q5VWM6 474 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 ZNF470Q6ECI4 717 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 NEPROQ6NW34 567 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 RNF44Q7L0R7 432 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 CUZD1Q86UP6 607 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 CILP2Q8IUL8 1156 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 HMGCLL1Q8TB92 370 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 C8orf44Q96CB5 159 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 SLC29A3Q9BZD2 475 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 WDR54Q9H977 334 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 PLEKHB1Q9UF11 243 aaPredicted RBP13.52□□□□□ -0.25
SHOX-202ENST00000381575 PPP2R2CQ9Y2T4 447 aa13.52□□□□□ -0.25
SHOX-202ENST00000381575 OR2A25A4D2G3 310 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 FITM1A5D6W6 292 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 TARM1B6A8C7 271 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 H0YGG7 62 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 AP3B1O00203 1094 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 IGHEP01854 428 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 ALBP02768 609 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 STATHP02808 62 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 ESR1P03372 595 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 ERVK-10P10266 1014 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 PKMP14618 531 aaKnown RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 OGNP20774 298 aaKnown RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 CMPK1P30085 196 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 GLRBP48167 497 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 CDK16Q00536 496 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 KLC1Q07866 573 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 Q0VFX4 171 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 CTBP1Q13363 440 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
SHOX-202ENST00000381575 ZADH2Q8N4Q0 377 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 AMER2Q8N7J2 671 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 OR9A1PQ8NGU1 263 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 CABS1Q96KC9 395 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 PKP4Q99569 1192 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 CRB3Q9BUF7 120 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 SLC26A1Q9H2B4 701 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 MRPS30Q9NP92 439 aaKnown RBP13.51□□□□□ -0.25
SHOX-202ENST00000381575 SPATA7Q9P0W8 599 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 TAC3Q9UHF0 121 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 CPAMD8Q8IZJ3 1885 aa13.51□□□□□ -0.25
SHOX-202ENST00000381575 LRBAP50851 2863 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 H3BMM5 538 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 KIF5CO60282 957 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
SHOX-202ENST00000381575 USP1O94782 785 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 FKBP9O95302 570 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
SHOX-202ENST00000381575 ONECUT2O95948 504 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 ERGP11308 486 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 FBLP22087 321 aaKnown RBP13.5□□□□□ -0.25
SHOX-202ENST00000381575 ATP5DP30049 168 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 RPA3P35244 121 aaPredicted RBP13.5□□□□□ -0.25
SHOX-202ENST00000381575 CLCN7P51798 805 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 HKDC1Q2TB90 917 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 FAM214AQ32MH5 1076 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 ANKRD20A4Q4UJ75 823 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 C4orf17Q53FE4 359 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 VWA2Q5GFL6 755 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
SHOX-202ENST00000381575 FBXO42Q6P3S6 717 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 IGFL3Q6UXB1 125 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 PLD3Q8IV08 490 aa13.5□□□□□ -0.25
SHOX-202ENST00000381575 REXO1L1PQ8IX06 675 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms