RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 PFKLP17858 780 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 RPS26P62854 115 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 MC1RQ01726 317 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PCBP2Q15366 365 aaKnown RBP eCLIP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 SMN1Q16637 294 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 SYT16Q17RD7 645 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ANKDD1AQ495B1 522 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PDCD4Q53EL6 469 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 USP39Q53GS9 565 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ARTNQ5T4W7 220 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ASTLQ6HA08 431 aaPredicted RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 AHSA2Q719I0 299 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 MMAAQ8IVH4 418 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ADHFE1Q8IWW8 467 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ZUFSPQ96AP4 578 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 HTATIP2Q9BUP3 242 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 EMILIN2Q9BXX0 1053 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ACTL8Q9H568 366 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 AASDHPPTQ9NRN7 309 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 OARD1Q9Y530 152 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 GMPPBQ9Y5P6 360 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 CEPT1Q9Y6K0 416 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 CDH1P12830 882 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 EPCAMP16422 314 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 LAG3P18627 525 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 IGFBP5P24593 272 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 MAT2AP31153 395 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PIGAP37287 484 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 CSRP3P50461 194 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 CLCN4P51793 760 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PON2Q15165 354 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 CATSPEREQ5SY80 951 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 GALNT18Q6P9A2 607 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PIWIL3Q7Z3Z3 882 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 THAP5Q7Z6K1 395 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 DOK4Q8TEW6 326 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 GPATCH1Q9BRR8 931 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 EXOSC4Q9NPD3 245 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 MIEF1Q9NQG6 463 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PADI4Q9UM07 663 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
DNMT3A-203ENST00000380746 NYNRINQ9P2P1 1898 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 ATE1O95260 518 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 ATP4BP51164 291 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 SUOXP51687 545 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 RAD23AP54725 363 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 RPS13P62277 151 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 NKG7Q16617 165 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 NOXRED1Q6NXP6 359 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 TTC23LQ6PF05 361 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 AGTRAPQ6RW13 159 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 DLEU7Q6UYE1 221 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 CARM1Q86X55 608 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 JPH3Q8WXH2 748 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 GTPBP3Q969Y2 492 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 SCRN2Q96FV2 425 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 BARD1Q99728 777 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 HEPHQ9BQS7 1158 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 BACE2Q9Y5Z0 518 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 PRUNE2Q8WUY3 3088 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 RHOP08100 348 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 ITGB8P26012 769 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 RFX3P48380 749 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 RAB33AQ14088 237 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 DOC2AQ14183 400 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 GRM2Q14416 872 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 CCDC92Q53HC0 331 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 CPTPQ5TA50 214 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 THOC6Q86W42 341 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 OR4A15Q8NGL6 344 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 PEX13Q92968 403 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 KCNC2Q96PR1 638 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 MACROD1Q9BQ69 325 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 TRIM39Q9HCM9 518 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 PTBP2Q9UKA9 531 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 PCDHGA8Q9Y5G5 932 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 BRWD1Q9NSI6 2320 aa10.63□□□□□ -0.71
DNMT3A-203ENST00000380746 ANKDD1BA6NHY2 528 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 BCKDKO14874 412 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 RASAL1O95294 804 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 SDC1P18827 310 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 JAK1P23458 1154 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 SPINT3P49223 89 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 NAA20P61599 178 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 CNTN1Q12860 1018 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 BROXQ5VW32 411 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 TNFAIP8L2Q6P589 184 aaPredicted RBP10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 ADCK1Q86TW2 530 aa10.62□□□□□ -0.71
DNMT3A-203ENST00000380746 ZNF740Q8NDX6 193 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms