RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SLAMF8Q9P0V8 285 aa7.52□□□□□ -1.21
CDKL5-202ENST00000379996 USP22Q9UPT9 525 aa7.52□□□□□ -1.21
CDKL5-202ENST00000379996 NCKAP1Q9Y2A7 1128 aa7.52□□□□□ -1.21
CDKL5-202ENST00000379996 LRP4O75096 1905 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 C1orf232A0A0U1RR37 186 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TCRBV21S2A2A0A5A6 115 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ANTXRLA6NF34 631 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPR89AB7ZAQ6 455 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CDC7O00311 574 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 VPS4BO75351 444 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ESRRBO95718 433 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPR89BP0CG08 455 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 EEF1DP29692 281 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GRIA3P42263 894 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 AGTR2P50052 363 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 NAA20P61599 178 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 RPS21P63220 83 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 EMX2Q04743 252 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 Q6ZS52 159 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 C11orf74Q86VG3 221 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ZFAND4Q86XD8 727 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 AFAP1L2Q8N4X5 818 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CADM4Q8NFZ8 388 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 PDLIM5Q96HC4 596 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CARS2Q9HA77 564 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 MID1IP1Q9NPA3 183 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 C8orf4Q9NR00 106 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPR27Q9NS67 375 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CROCCQ5TZA2 2017 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 DHRS12A0PJE2 317 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 E9PQ18 207 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TGFBR3LH3BV60 316 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 J3QW42 95 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 NR5A2O00482 541 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 KPNA3O00505 521 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 OR7A17O14581 309 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 RSL1D1O76021 490 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CLDN7O95471 211 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 NPPAP01160 153 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPIP06744 558 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 DCKP27707 260 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 HTR1EP28566 365 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GSK3BP49841 420 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ARHGEF7Q14155 803 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CAPRIN1Q14444 709 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 PFKFB4Q16877 469 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 PSAPL1Q6NUJ1 521 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TBPL2Q6SJ96 375 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPR180Q86V85 440 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 WDR5BQ86VZ2 330 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 SPPL2CQ8IUH8 684 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ZNF366Q8N895 744 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 DDHD1Q8NEL9 900 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TRPV3Q8NET8 790 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 OR4K2Q8NGD2 314 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TANKQ92844 425 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 SIPA1Q96FS4 1042 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 CCDC115Q96NT0 180 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ZNF382Q96SR6 550 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 GPR63Q9BZJ6 419 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TRIM8Q9BZR9 551 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 RPF2Q9H7B2 306 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 IL26Q9NPH9 171 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 ZIM2Q9NZV7 527 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 RSL24D1Q9UHA3 163 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 FBXO4Q9UKT5 387 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 NDRG2Q9UN36 371 aaKnown RBP7.51□□□□□ -1.21
CDKL5-202ENST00000379996 FIS1Q9Y3D6 152 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 SNX13Q9Y5W8 968 aa7.51□□□□□ -1.21
CDKL5-202ENST00000379996 TRBV5-3A0A0A0MS03 114 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 GLYATL1P3A0A0U1RQE8 302 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 WNT9AO14904 365 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 STX7O15400 261 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TRMUO75648 421 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ATP6V1B1P15313 513 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LBPP18428 481 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TTPAP49638 278 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TPMTP51580 245 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 METAP1P53582 386 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 EEFSECP57772 596 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 MERTKQ12866 999 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TBC1D25Q3MII6 688 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 MRNIPQ6NTE8 343 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 SBSNQ6UWP8 590 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 HSD11B1LQ7Z5J1 315 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TSPAN33Q86UF1 283 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 HDDC3Q8N4P3 179 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CBR4Q8N4T8 237 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CXorf40AQ8TE69 158 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CENPNQ96H22 339 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 COX14Q96I36 57 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CNDP2Q96KP4 475 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TMEM79Q9BSE2 394 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ADI1Q9BV57 179 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CLK4Q9HAZ1 481 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 MYRFQ9Y2G1 1151 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 C9JVG2 144 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LSM1O15116 133 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PFDN6O15212 129 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 AP2A2O94973 939 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms