RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 LRCH3Q96II8 777 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CLSTN3Q9BQT9 956 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 C8orf4Q9NR00 106 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CDK5RAP2Q96SN8 1893 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 LAMB1P07942 1786 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ASCC3Q8N3C0 2202 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 M0QX08 132 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 RB1P06400 928 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ACADVLP49748 655 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 IFI44LQ53G44 452 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 NCEH1Q6PIU2 408 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ADGRG2Q8IZP9 1017 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 POP5Q969H6 163 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CASD1Q96PB1 797 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 IGSF5Q9NSI5 407 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 GABBR2O75899 941 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 NR2F6P10588 404 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CDH1P12830 882 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 FOXA1P55317 472 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TAS2R50P59544 299 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CCNIQ14094 377 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TEAD4Q15561 434 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 DCST1Q5T197 706 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF730Q6ZMV8 503 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 RELTQ969Z4 430 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF641Q96N77 438 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 SLC35A5Q9BS91 424 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TTLL2Q9BWV7 592 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 IL26Q9NPH9 171 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF282Q9UDV7 671 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TSC22D4Q9Y3Q8 395 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ERI3O43414 337 aaKnown RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CBSLP0DN79 551 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 LAMP2P13473 410 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ATF6P18850 670 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ALAS2P22557 587 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ACRV1P26436 265 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CBSP35520 551 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 RAB8AP61006 207 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CSNK2BP67870 215 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ANGPT1Q15389 498 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 MINDY4Q4G0A6 757 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ERMP1Q7Z2K6 904 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 SLCO6A1Q86UG4 719 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 PRSS58Q8IYP2 241 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 GLYATL1Q969I3 302 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ART5Q96L15 291 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 COL21A1Q96P44 957 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 IL17CQ9P0M4 197 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 PRORSD1PA6NEY8 169 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 LRRC72A6NJI9 287 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 PDPK1O15530 556 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 CCDC159P0C7I6 412 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 PRDX3P30048 256 aaKnown RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 FMO3P31513 532 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 SNAPC1Q16533 368 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 TICAM1Q8IUC6 712 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 UTP4Q969X6 686 aaKnown RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 ZBED6CLQ96FA7 236 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 FBXL20Q96IG2 436 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 MRPS30Q9NP92 439 aaKnown RBP12.84□□□□□ -0.35
NPHP4-203ENST00000378169 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
NPHP4-203ENST00000378169 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 GADD45GO95257 159 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 SAGP10523 405 aaPredicted RBP12.83□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF805Q5CZA5 627 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 ARRDC2Q8TBH0 407 aa12.83□□□□□ -0.35
NPHP4-203ENST00000378169 PRICKLE1Q96MT3 831 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms