RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DNAJB14Q8TBM8 379 aa14.1□□□□□ -0.15
HDAC6-204ENST00000376643 RERGQ96A58 199 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 BARD1Q99728 777 aaKnown RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 EBNA1BP2Q99848 306 aaKnown RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 CCDC68Q9H2F9 335 aa14.1□□□□□ -0.15
HDAC6-204ENST00000376643 SOX17Q9H6I2 414 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 INTS10Q9NVR2 710 aaKnown RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 KLHL42Q9P2K6 505 aa14.1□□□□□ -0.15
HDAC6-204ENST00000376643 SOX13Q9UN79 622 aa14.1□□□□□ -0.15
HDAC6-204ENST00000376643 NOVA2Q9UNW9 492 aaKnown RBP14.1□□□□□ -0.15
HDAC6-204ENST00000376643 ICE1Q9Y2F5 2266 aa14.1□□□□□ -0.15
HDAC6-204ENST00000376643 PCM1Q15154 2024 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 A0A0J9YVX5 310 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 MAGEB16A2A368 324 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 DYTNA2CJ06 578 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 OR2A25A4D2G3 310 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 WIPF3A6NGB9 483 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 MATN4O95460 622 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 FGGP02679 453 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CTSBP07858 339 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 ANXA5P08758 320 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CCDC175P0C221 793 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 FBLP22087 321 aaKnown RBP14.09□□□□□ -0.15
HDAC6-204ENST00000376643 NMBRP28336 390 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 ABATP80404 500 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 RELAQ04206 551 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CDC16Q13042 620 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CRB2Q5IJ48 1285 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 FAM180AQ6UWF9 173 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CUZD1Q86UP6 607 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 LMNTD2Q8IXW0 634 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 KBTBD2Q8IY47 623 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 OR2A1Q8NGT9 310 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 GABPB2Q8TAK5 448 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-204ENST00000376643 STT3BQ8TCJ2 826 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 C19orf60Q96EN9 201 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 THOC3Q96J01 351 aaKnown RBP14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 MRPS30Q9NP92 439 aaKnown RBP14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CTSFQ9UBX1 484 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 ZC3H7BQ9UGR2 993 aaKnown RBP14.09□□□□□ -0.15
HDAC6-204ENST00000376643 CIDEBQ9UHD4 219 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 C3orf18Q9UK00 162 aa14.09□□□□□ -0.15
HDAC6-204ENST00000376643 FER1L5A0AVI2 2057 aa14.08□□□□□ -0.15
HDAC6-204ENST00000376643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 IGLV3-12A0A075B6K2 115 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 NSG1A0A0A6YYJ2 146 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MYO1CO00159 1063 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CTSVO60911 334 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 LDLRP01130 860 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 UQCRHP07919 91 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CYC1P08574 325 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ZGLP1P0C6A0 271 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ZSCAN5DPP0CG00 497 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ERGP11308 486 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ICAM2P13598 275 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ENO3P13929 434 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 EDN3P14138 238 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 EZRP15311 586 aaKnown RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MCM3P25205 808 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MGAT1P26572 445 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 FMO4P31512 558 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 OR1D4P47884 311 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CRADDP78560 199 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MFAP5Q13361 173 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 DSG2Q14126 1118 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 GBX1Q14549 363 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 RPUSD3Q6P087 351 aaKnown RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CASC4Q6P4E1 433 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 RIPOR1Q6ZS17 1223 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CALML6Q8TD86 181 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MFSD3Q96ES6 412 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 CNDP1Q96KN2 507 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 BIRC8Q96P09 236 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 PLCD4Q9BRC7 762 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 DPH7Q9BTV6 452 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 XAB2Q9HCS7 855 aaKnown RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 SYBUQ9NX95 663 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ERRFI1Q9UJM3 462 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-204ENST00000376643 NFS1Q9Y697 457 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 COMMD10Q9Y6G5 202 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 MAU2Q9Y6X3 613 aa14.08□□□□□ -0.16
HDAC6-204ENST00000376643 ANKRD12Q6UB98 2062 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 A0A0U1RQJ8 604 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 PSIP1O75475 530 aaKnown RBP14.07□□□□□ -0.16
HDAC6-204ENST00000376643 MLNP12872 115 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 HRH2P25021 359 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 PSMB5P28074 263 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 KLC1Q07866 573 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
HDAC6-204ENST00000376643 PRTGQ2VWP7 1150 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 CTSL3PQ5NE16 218 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 LRRC8EQ6NSJ5 796 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 NDUFAF7Q7L592 441 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 PRUNE1Q86TP1 453 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms