RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 TTC23LQ6PF05 361 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 SUSD1Q6UWL2 747 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 PRR23BQ6ZRT6 265 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 PROSER1Q86XN7 944 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 TCAIMQ8N3R3 496 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 KRTCAP2Q8N6L1 136 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 ZNF366Q8N895 744 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 ABHD11Q8NFV4 315 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 OR13F1Q8NGS4 319 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 SLC13A3Q8WWT9 602 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 ELMO1Q92556 727 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 LRRC3BQ96PB8 259 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 ACPTQ9BZG2 426 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 C1orf109Q9NX04 203 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 IL36AQ9UHA7 158 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
MSH5-202ENST00000375740 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
MSH5-202ENST00000375740 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.23
MSH5-202ENST00000375740 ACOX3O15254 700 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 XYLBO75191 536 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 CEBPBP17676 345 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.23
MSH5-202ENST00000375740 DMPKQ09013 629 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 SELENBP1Q13228 472 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 AQP6Q13520 282 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 CAMK1Q14012 370 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 FXNQ16595 210 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.23
MSH5-202ENST00000375740 NEK5Q6P3R8 708 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 RTL10Q7L3V2 364 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 LRRC70Q7Z2Q7 622 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 SELENOMQ8WWX9 145 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 WBP1LQ9NX94 342 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 VAPAQ9P0L0 249 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 ANAPC2Q9UJX6 822 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 SLC22A14Q9Y267 594 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 NEUROG3Q9Y4Z2 214 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 PCDHB3Q9Y5E6 796 aa13.58□□□□□ -0.23
MSH5-202ENST00000375740 OR2AG2A6NM03 316 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 PER2O15055 1255 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 KPNA5O15131 536 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 DFNA5O60443 496 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 MYO1DO94832 1006 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 SNAP29O95721 258 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 MT-ND1P03886 318 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 UMPSP11172 480 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 BCKDHAP12694 445 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 XPAP23025 273 aaPredicted RBP13.58□□□□□ -0.24
MSH5-202ENST00000375740 SLC6A12P48065 614 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 FPGSQ05932 587 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 GRSF1Q12849 480 aaKnown RBP eCLIP13.58□□□□□ -0.24
MSH5-202ENST00000375740 SPCS2Q15005 226 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 DHCR24Q15392 516 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 SPANXN4Q5MJ08 99 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 TRAM1L1Q8N609 369 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 CLHC1Q8NHS4 586 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 MCOLN3Q8TDD5 553 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 CENPNQ96H22 339 aaPredicted RBP13.58□□□□□ -0.24
MSH5-202ENST00000375740 SH3YL1Q96HL8 342 aaPredicted RBP13.58□□□□□ -0.24
MSH5-202ENST00000375740 SEPHS2Q99611 448 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 LHPPQ9H008 270 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 POLE4Q9NR33 117 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 IFT80Q9P2H3 777 aaPredicted RBP13.58□□□□□ -0.24
MSH5-202ENST00000375740 V9GYQ6 96 aa13.58□□□□□ -0.24
MSH5-202ENST00000375740 KCNE1BA0A087WTH5 132 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 TSPAN11A1L157 253 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 PABPN1LA6NDY0 278 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 SLC16A5O15375 505 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CISD3P0C7P0 127 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CYP2A7P20853 494 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 S100A1P23297 94 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 EEF1B2P24534 225 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 HOXA9P31269 272 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 TTKP33981 857 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 HNMTP50135 292 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 RAD23AP54725 363 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 DCDC1P59894 354 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CYBRD1Q53TN4 286 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ABRAXAS1Q6UWZ7 409 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 PAPD5Q8NDF8 572 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 CCDC138Q96M89 665 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ASIC5Q9NY37 505 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 B3GNT3Q9Y2A9 372 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 TMEM202A6NGA9 273 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 FAM47E-STBD1D6RA91 191 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 PRAMEF4O60810 478 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 PGRP06401 933 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 HNRNPA1P09651 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms