RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NOXRED1Q6NXP6 359 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 NEK5Q6P3R8 708 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 TPRG1Q6ZUI0 275 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 B3GNT8Q7Z7M8 397 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 SLCO6A1Q86UG4 719 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 L3MBTL4Q8NA19 623 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 OR7A2PQ8NGA2 310 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 PANX1Q96RD7 426 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 CLEC4EQ9ULY5 219 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 SLC22A14Q9Y267 594 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 GMPPBQ9Y5P6 360 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 hCG_2039718K7EN88 272 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 PRRG1O14668 218 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 FPGTO14772 594 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 BNIP3LO60238 219 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 C8GP07360 202 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 AOAHP28039 575 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 IDUAP35475 653 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 MAP2K4P45985 399 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 TRPC1P48995 793 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 KEAP1Q14145 624 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 DUOXA1Q1HG43 343 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 TPGS2Q68CL5 300 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 NIPAL1Q6NVV3 410 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 Q6ZNB5 142 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 ZNF621Q6ZSS3 439 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 NELL1Q92832 810 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 GABARAPL1Q9H0R8 117 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 DUSP21Q9H596 190 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 HMG20AQ9NP66 347 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 PCDHGA10Q9Y5H3 936 aa14.14□□□□□ -0.15
MSH5-201ENST00000375703 M0R3G1 203 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 TOR1BO14657 336 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 KCNK5O95279 499 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 UGT2B4P06133 528 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 PCSK2P16519 638 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 JUNDP17535 347 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 DNAJA1P31689 397 aaKnown RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 KDELR2P33947 212 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 HALP42357 657 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 HNMTP50135 292 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 PTSQ03393 145 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 LMAN2Q12907 356 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 BOP1Q14137 746 aaKnown RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 VMACQ2NL98 169 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 FRG2Q64ET8 278 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 CAPN13Q6MZZ7 669 aaPredicted RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 RFLNAQ6ZTI6 216 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 MSANTD1Q6ZTZ1 278 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 OR2AP1Q8NGE2 309 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 ASB11Q8WXH4 323 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 SCRN2Q96FV2 425 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 IGSF21Q96ID5 467 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 FRG2BQ96QU4 278 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 LYSMD1Q96S90 227 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 ABCB8Q9NUT2 735 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 PDP1Q9P0J1 537 aaPredicted RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 RPS6KA6Q9UK32 745 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 HSPE1-MOB4S4R3N1 261 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 GABARAPO95166 117 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 FKBP9O95302 570 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 FABP3P05413 133 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 PRPS1L1P21108 318 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 ITPKAP23677 461 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 CD6P30203 668 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 SLC6A12P48065 614 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 CXCR4P61073 352 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 LSM3P62310 102 aaKnown RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 SLC35A2P78381 396 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 GBX1Q14549 363 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 CCDC81Q6ZN84 652 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 GALNT10Q86SR1 603 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 HORMAD1Q86X24 394 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 SYT12Q8IV01 421 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 RNF175Q8N4F7 328 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 TTC29Q8NA56 475 aaPredicted RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 ZBTB8BQ8NAP8 495 aaPredicted RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 ZNF540Q8NDQ6 660 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 ZNF641Q96N77 438 aaPredicted RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 HHIPQ96QV1 700 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 APOL4Q9BPW4 351 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 EBPLQ9BY08 206 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 REXO4Q9GZR2 422 aaKnown RBP14.13□□□□□ -0.15
MSH5-201ENST00000375703 ARMC7Q9H6L4 198 aa14.13□□□□□ -0.15
MSH5-201ENST00000375703 UPK3BL1B0FP48 263 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 UPK3BL2E5RIL1 263 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 EIF3FO00303 357 aaPredicted RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 KPNA4O00629 521 aaPredicted RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 SLC22A1O15245 554 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 PRAMEF4O60810 478 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 FPR1P21462 350 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 SRSF11Q05519 484 aaKnown RBP14.12□□□□□ -0.15
MSH5-201ENST00000375703 CBX3Q13185 183 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 CYP2A13Q16696 494 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 TRIM16LQ309B1 348 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 PRAMEF9Q5VWM5 478 aa14.12□□□□□ -0.15
MSH5-201ENST00000375703 CYP2U1Q7Z449 544 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms