RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VLDLRP98155 873 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 CREMQ03060 361 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 TWF1Q12792 350 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 MAD2L1Q13257 205 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM171A1Q5VUB5 890 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 Q6ZPB1 254 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 TAS1R1Q7RTX1 841 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM83FQ8NEG4 500 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 BCL7CQ8WUZ0 217 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 ULK4Q96C45 1275 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 EGLN2Q96KS0 407 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 SIRT5Q9NXA8 310 aa13.74□□□□□ -0.21
CLCNKA-202ENST00000375692 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ERN1O75460 977 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 SLC25A14O95258 325 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 GLUD1P00367 558 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 GTF2E2P29084 291 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 MAGEA2P43356 314 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 CLK1P49759 484 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 MVKQ03426 396 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 KEAP1Q14145 624 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ATAD3BQ5T9A4 648 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 POC5Q8NA72 575 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 FUBP3Q96I24 572 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 APOL4Q9BPW4 351 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ADGRE3Q9BY15 652 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ACPTQ9BZG2 426 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 C6orf62Q9GZU0 229 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 KCNH6Q9H252 994 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PARVBQ9HBI1 364 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 IL1RAPQ9NPH3 570 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 IL37Q9NZH6 218 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 NDRG4Q9ULP0 352 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PPT2Q9UMR5 302 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PCDHB9Q9Y5E1 797 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 A0A096LPI6 279 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 OR2A25A4D2G3 310 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PCDHGA12O60330 932 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 UPK1BO75841 260 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 KCNK2O95069 426 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 C21orf33P30042 268 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PCYT1AP49585 367 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ARHGDIAP52565 204 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 RPS14P62263 151 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 SOWAHCQ53LP3 525 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 STEAP3Q658P3 488 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 SERPINA9Q86WD7 417 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 TMEM132CQ8N3T6 1108 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ATG16L2Q8NAA4 619 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM126AQ9BYI3 521 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 EHD1Q9H4M9 534 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 OLA1Q9NTK5 396 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 MARCH5Q9NX47 278 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
CLCNKA-202ENST00000375692 PSMD11O00231 422 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 DLGAP3O95886 979 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 PDYNP01213 254 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 VIPP01282 170 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 DBTP11182 482 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 NR4A2P43354 598 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 CXCR4P61073 352 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 RPP38P78345 283 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 CACNG1Q06432 222 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 LRIF1Q5T3J3 769 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 SVOPQ8N4V2 548 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 DNASE1L2Q92874 299 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 GPR63Q9BZJ6 419 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 CLPBQ9H078 707 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 RNF167Q9H6Y7 350 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 KRT84Q9NSB2 600 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 IL17CQ9P0M4 197 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 SAMHD1Q9Y3Z3 626 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 OARD1Q9Y530 152 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 ACSL4O60488 711 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 TIMP1P01033 207 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 GALTP07902 379 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 ZNF24P17028 368 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 RING1Q06587 406 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 ARHGEF7Q14155 803 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 OR4F3Q6IEY1 312 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 APH1BQ8WW43 257 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms