RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 NUDT14O95848 222 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 BCHEP06276 602 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 AVPR1BP47901 424 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C5orf22Q49AR2 442 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PAGE3Q5JUK9 113 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF280BQ86YH2 543 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SMIM14Q96QK8 99 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RIOK2Q9BVS4 552 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 FUNDC2Q9BWH2 189 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GSTO2Q9H4Y5 243 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM181Q9P2C4 612 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SELPP16109 830 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 AGXTP21549 392 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GRIA2P42262 883 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CYBRD1Q53TN4 286 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 LRRC17Q8N6Y2 441 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 DTX3Q8N9I9 347 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 L3HYPDHQ96EM0 354 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TBC1D3BA6NDS4 549 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 HAT1O14929 419 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 RPL3P39023 403 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SSR2P43308 183 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TMBIM6P55061 237 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 EMX2Q04743 252 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 C6orf136Q5SQH8 315 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 IFNLR1Q8IU57 520 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF366Q8N895 744 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ITFG2Q969R8 447 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF780BQ9Y6R6 833 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 IGKV6-21A0A0C4DH24 114 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 LCHNA4D1U4 455 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ANKRD66B4E2M5 251 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PLOD2O00469 737 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FBP2O00757 339 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CPNE3O75131 537 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GGT1P19440 569 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 WASP42768 502 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 OLR1P78380 273 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF829Q3KNS6 432 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PIWIL3Q7Z3Z3 882 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TTC9BQ8N6N2 239 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GLB1L3Q8NCI6 653 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NAA50Q9GZZ1 169 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 AIG1Q9NVV5 245 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ING4Q9UNL4 249 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GMEB1Q9Y692 573 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FABP12A6NFH5 140 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ACOX3O15254 700 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ATE1O95260 518 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GJB5O95377 273 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PRDX3P30048 256 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PREPP48147 710 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NCBP2P52298 156 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 KIAA1161Q6NSJ0 714 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 KAT2AQ92830 837 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 QRFPRQ96P65 431 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PRAMEF33A0A0G2JMD5 474 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PRAMEF10O60809 474 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PRPS2P11908 318 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SMIM11AP58511 58 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 RPS13P62277 151 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ZFAND4Q86XD8 727 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NPAS4Q8IUM7 802 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ANKLE1Q8NAG6 615 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NETO1Q8TDF5 533 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TRMT61BQ9BVS5 477 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 HMX1Q9NP08 348 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CCDC177Q9NQR7 707 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 VPS51Q9UID3 782 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CROCCQ5TZA2 2017 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TRBV23OR9-2A0A075B6M9 112 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 M0R129 80 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 STX16O14662 325 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 DUSP11O75319 330 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PENKP01210 267 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 EDNRBP24530 442 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NSG1P42857 185 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SELPLGQ14242 412 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ARSIQ5FYB1 569 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FAM180BQ6P0A1 224 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SERPINA13PQ6UXR4 307 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TMPRSS11AQ6ZMR5 421 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 LRRC70Q7Z2Q7 622 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FAM220AQ7Z4H9 259 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 DSG4Q86SJ6 1040 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 C17orf64Q86WR6 236 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 MINDY2Q8NBR6 621 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 HDAC2Q92769 488 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 MYRFLQ96LU7 910 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 TM9SF3Q9HD45 589 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NKIRAS2Q9NYR9 191 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 GPRC5BQ9NZH0 403 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 RIMKLBQ9ULI2 386 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FAM25EA8MYX2 175 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 H0YAE9 185 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 APOL3O95236 402 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ABATP80404 500 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 EXOC3L2Q2M3D2 409 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PLEKHG6Q3KR16 790 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms