RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 MAP2K7O14733 419 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 JRKO75564 520 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 FTCDO95954 541 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 STIP1P31948 543 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 SOX11P35716 441 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 FDFT1P37268 417 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 BDKRB1P46663 353 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 TDGF1P3P51864 188 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 YBX1P67809 324 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 OCA2Q04671 838 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 VWA2Q5GFL6 755 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 SP5Q6BEB4 398 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 PRMT9Q6P2P2 845 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 PRUNE1Q86TP1 453 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 OR2A1Q8NGT9 310 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 PEX13Q92968 403 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 C10orf90Q96M02 699 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 TAAR6Q96RI8 345 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 UNKQ9C0B0 810 aaKnown RBP13.15□□□□□ -0.3
CXCL12-202ENST00000374426 P2RY12Q9H244 342 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 CATSPERZQ9NTU4 200 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 OR2A25A4D2G3 310 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 E7EVH7 732 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PCDH17O14917 1159 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 LIASO43766 372 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 USP1O94782 785 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 IFNB1P01574 187 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 EIF2S1P05198 315 aaKnown RBP13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PRR35P0CG20 571 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 COX6A1P12074 109 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 TTPAP49638 278 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 TNFSF10P50591 281 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 KCNK10P57789 538 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 ARG2P78540 354 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PTRHD1Q6GMV3 140 aaKnown RBP13.14□□□□□ -0.31
CXCL12-202ENST00000374426 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
CXCL12-202ENST00000374426 SKA2Q8WVK7 121 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-202ENST00000374426 RELTQ969Z4 430 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 MAGEB10Q96LZ2 347 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-202ENST00000374426 SYNPO2LQ9H987 977 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PLA2G3Q9NZ20 509 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 ANAPC5Q9UJX4 755 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 AKAP9Q99996 3911 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
CXCL12-202ENST00000374426 NSG1A0A0A6YYJ2 146 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 DYTNA2CJ06 578 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 IDSB3KWA1 339 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 PRSS44E7EML9 344 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 CD3EAPO15446 510 aaKnown RBP13.13□□□□□ -0.31
CXCL12-202ENST00000374426 APRTP07741 180 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 ETS1P14921 441 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 FBLP22087 321 aaKnown RBP13.13□□□□□ -0.31
CXCL12-202ENST00000374426 ELAVL4P26378 380 aaKnown RBP13.13□□□□□ -0.31
CXCL12-202ENST00000374426 FASTKQ14296 549 aaKnown RBP13.13□□□□□ -0.31
CXCL12-202ENST00000374426 MUM1Q2TAK8 710 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 CNSTQ6PJW8 725 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 SYCE1Q8N0S2 351 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 SIRT6Q8N6T7 355 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 PPHLN1Q8NEY8 458 aaKnown RBP13.13□□□□□ -0.31
CXCL12-202ENST00000374426 NR4A3Q92570 626 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 PANX3Q96QZ0 392 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 DPH7Q9BTV6 452 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 TREX1Q9NSU2 369 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 COPG2Q9UBF2 871 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 GNPTGQ9UJJ9 305 aa13.13□□□□□ -0.31
CXCL12-202ENST00000374426 TRAV17A0A0B4J275 112 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 H0YGG7 62 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 FFAR3O14843 346 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 KPNA5O15131 536 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 GPR42O15529 346 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 SERPINA7P05543 415 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 CELA2AP08217 269 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-202ENST00000374426 FDXRP22570 491 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
CXCL12-202ENST00000374426 CCNFP41002 786 aa13.12□□□□□ -0.31
CXCL12-202ENST00000374426 EMP2P54851 167 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms