RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 UGDHO60701 494 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 HOXB2P14652 356 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 TIMP2P16035 220 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 GABRG2P18507 467 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 IL10P22301 178 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 PRPH2P23942 346 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 NTSR1P30989 418 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 GNPDA1P46926 289 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 SLC6A12P48065 614 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 FOLH1Q04609 750 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 MAP7Q14244 749 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 SLC36A4Q6YBV0 504 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 PACRGLQ8N7B6 248 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 ANKFN1Q8N957 763 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 MCOLN3Q8TDD5 553 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 ASZ1Q8WWH4 475 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 EME1Q96AY2 570 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 KCTD14Q9BQ13 255 aaPredicted RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 GTPBP2Q9BX10 602 aaKnown RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 KLQ9UEF7 1012 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 RALYQ9UKM9 306 aaKnown RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 HCN2Q9UL51 889 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 TMPRSS11EQ9UL52 423 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 CNOT6Q9ULM6 557 aaKnown RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 SLC6A14Q9UN76 642 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 WASF3Q9UPY6 502 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 POLR3HQ9Y535 204 aaPredicted RBP13.68□□□□□ -0.22
LDB3-204ENST00000372066 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 ZFHX4Q86UP3 3567 aa13.68□□□□□ -0.22
LDB3-204ENST00000372066 DHRS12A0PJE2 317 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 DPPA5A6NC42 116 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 TTC34A8MYJ7 566 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 RNASEH1O60930 286 aaKnown RBP13.67□□□□□ -0.22
LDB3-204ENST00000372066 PRNPP04156 253 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 GSTM1P09488 218 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 G6PDP11413 515 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 BMP2P12643 396 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ATP6V1B2P21281 511 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 MAPK1P28482 360 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 IL12AP29459 219 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 MMP12P39900 470 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 GRIA3P42263 894 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 GSK3BP49841 420 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 CHN2P52757 468 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 GSTM4Q03013 218 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 BOP1Q14137 746 aaKnown RBP13.67□□□□□ -0.22
LDB3-204ENST00000372066 PDK3Q15120 406 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 DUOXA1Q1HG43 343 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 MTX3Q5HYI7 312 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 OR52E8Q6IFG1 317 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 HSD11B1LQ7Z5J1 315 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 KLHDC8AQ8IYD2 350 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 CHPFQ8IZ52 775 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 DCBLD1Q8N8Z6 715 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 L3MBTL4Q8NA19 623 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ATL1Q8WXF7 558 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 GLMNQ92990 594 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 POP5Q969H6 163 aaKnown RBP13.67□□□□□ -0.22
LDB3-204ENST00000372066 VPS33AQ96AX1 596 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 SLCO4A1Q96BD0 722 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 FBXL8Q96CD0 374 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 TRAPPC9Q96Q05 1148 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 SCNM1Q9BWG6 230 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 C1orf109Q9NX04 203 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 MAGEL2Q9UJ55 1249 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ZMIZ1Q9ULJ6 1067 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 ZNF490Q9ULM2 529 aaPredicted RBP13.67□□□□□ -0.22
LDB3-204ENST00000372066 TMED5Q9Y3A6 229 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 LRRK1Q38SD2 2015 aa13.67□□□□□ -0.22
LDB3-204ENST00000372066 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 TXNDC9O14530 226 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ARPC2O15144 300 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 IL6P05231 212 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 UBTFL6P0CB48 400 aaPredicted RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 PRPS2P11908 318 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 SLC2A4P14672 509 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 HOXD12P35452 270 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 RPL38P63173 70 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 SEMG2Q02383 582 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 LIPEQ05469 1076 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 HSPA14Q0VDF9 509 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 PWP1Q13610 501 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms