RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KHKP50053 298 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 TLE3Q04726 772 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 LGI4Q8N135 537 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 OR7G1Q8NGA0 311 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 LNX1Q8TBB1 728 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 EXOSC8Q96B26 276 aaKnown RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 POTEKPQ9BYX7 375 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 IPPKQ9H8X2 491 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF358Q9NW07 568 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 KELP23276 732 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 BDNFP23560 247 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ITPKAP23677 461 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 AXLP30530 894 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 DYRK1AQ13627 763 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 TMEM69Q5SWH9 247 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CERCAMQ5T4B2 595 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 TICAM1Q8IUC6 712 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF641Q96N77 438 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ASPNQ9BXN1 380 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 EBPLQ9BY08 206 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ERVK13-1Q9NX77 482 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 GRIN2DO15399 1336 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 LACTBL1A8MY62 500 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 IFNA5P01569 189 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CSF1RP07333 972 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ITGA5P08648 1049 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 FMO1Q01740 532 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 NDUFA9Q16795 377 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 PRAMEF13Q5VWM6 474 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 C16orf59Q7L2K0 433 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 SVBPQ8N300 66 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 YIPF7Q8N8F6 280 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 FAM46DQ8NEK8 389 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ZBED6CLQ96FA7 236 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 EXTL2Q9UBQ6 330 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 IRS2Q9Y4H2 1338 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 GRIA2P42262 883 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CBX2Q14781 532 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 BEND4Q6ZU67 534 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 NOXA1Q86UR1 476 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF675Q8TD23 568 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CXorf40AQ8TE69 158 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 SYT4Q9H2B2 425 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 RPF2Q9H7B2 306 aaKnown RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ITM2CQ9NQX7 267 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 PPP4R1LQ9P1A2 415 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CYP8B1Q9UNU6 501 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 ZBTB48P10074 688 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-201ENST00000371817 AOC1P19801 751 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 HSD17B2P37059 387 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 CD97P48960 835 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 LAPTM5Q13571 262 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 FAM122CQ6P4D5 195 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 RDH12Q96NR8 316 aa14.93□□□□□ -0.02
COL5A1-201ENST00000371817 NPIPA7E9PJI5 369 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ATP6V1G2-DDX39BF2Z307 99 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 LCKP06239 509 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 NPIPA8P0DM63 369 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 CAMLGP49069 296 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 NUDT6P53370 316 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 AARDQ4LEZ3 155 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 AQP11Q8NBQ7 271 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 BRSK1Q8TDC3 778 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF436Q9C0F3 470 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 MIR1-1HGQ9H1L0 117 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 CCDC163A0A0D9SF12 145 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 CAPN14A8MX76 684 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 RFPL3O75679 317 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 CDK1P06493 297 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 MMP10P09238 476 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 DSG2Q14126 1118 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF367Q7RTV3 350 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 PROKR2Q8NFJ6 384 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 OR5T2Q8NGG2 359 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ELAVL2Q12926 359 aaKnown RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 UBE2UQ5VVX9 321 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 OSTF1Q92882 214 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 P2RY11Q96G91 374 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 MS4A12Q9NXJ0 267 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 MYO5BQ9ULV0 1848 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FOXO6A8MYZ6 492 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 J3QLW9 94 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 VILLO15195 856 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF19P17023 458 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF155Q12901 538 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 BORAQ6PGQ7 559 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FEM1CQ96JP0 617 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 REEP4Q9H6H4 257 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 NLRP1Q9C000 1473 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 H0YAE9 185 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 ATP5C1P36542 298 aaKnown RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 RELAQ04206 551 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 DUSP4Q13115 394 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 MPP7Q5T2T1 576 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms