RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CA5AP35218 305 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 HSD17B7P56937 341 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 OC90Q02509 493 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 GNA13Q14344 377 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 HECTD2Q5U5R9 776 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 KLHL35Q6PF15 583 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 VRK3Q8IV63 474 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ZBTB2Q8N680 514 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 AVL9Q8NBF6 648 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 OR7G1Q8NGA0 311 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 NRBF2Q96F24 287 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 FAR2Q96K12 515 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 RILPQ96NA2 401 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ULBP3Q9BZM4 244 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 COPS7BQ9H9Q2 264 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 FBRSQ9HAH7 460 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 DYRK1BQ9Y463 629 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PCYT1BQ9Y5K3 369 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 ATP6AP2A0A1C7CYW4 349 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 TRIM64A6NGJ6 449 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 TRIM64BA6NI03 449 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 OR5K4A6NMS3 321 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PPM1DO15297 605 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ATP6AP2O75787 350 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 SIX3O95343 332 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 CEACAM5P06731 702 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ZNF806P0C7X5 589 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 IL1RNP18510 177 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 EPHA8P29322 1005 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 LEPRP48357 1165 aaKnown RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 RUNX1T1Q06455 604 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 KLF1Q13351 362 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 MAPRE2Q15555 327 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 GALNTL6Q49A17 601 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 METTL11BQ5VVY1 283 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PDPK2PQ6A1A2 396 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 LRRC8BQ6P9F7 803 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 FAM83HQ6ZRV2 1179 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 GPSM1Q86YR5 675 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 ZBTB44Q8NCP5 570 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 LKAAEAR1Q8TD35 194 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 PMEPA1Q969W9 287 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 RERGQ96A58 199 aaPredicted RBP6.83□□□□□ -1.32
USP1-202ENST00000371146 NXNL1Q96CM4 212 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 SIRT5Q9NXA8 310 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 SLC22A14Q9Y267 594 aa6.83□□□□□ -1.32
USP1-202ENST00000371146 DMDP11532 3685 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 MGAT4DA6NG13 374 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 GLOD5A6NK44 160 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TMEM150CB9EJG8 249 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 FAM107AO95990 144 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 F3P13726 295 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 ACADSP16219 412 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 LSP1P33241 339 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 ADARP55265 1226 aaKnown RBP6.82□□□□□ -1.32
USP1-202ENST00000371146 NXPH1P58417 271 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 SEMA3AQ14563 771 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 GPR19Q15760 415 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 CDONQ4KMG0 1287 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 XKR6Q5GH73 641 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 IRAK1BP1Q5VVH5 260 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 FOXB2Q5VYV0 432 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 ZNF276Q8N554 614 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 DTWD1Q8N5C7 304 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP1-202ENST00000371146 FBXO15Q8NCQ5 510 aaPredicted RBP6.82□□□□□ -1.32
USP1-202ENST00000371146 OR5M3Q8NGP4 307 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 AGAP11Q8TF27 550 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 RAD51AP1Q96B01 352 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 FAM111AQ96PZ2 611 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 LRRC4CQ9HCJ2 640 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 APMAPQ9HDC9 416 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TRPC4Q9UBN4 977 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 A0A088AWK7 358 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 GNG14A0A1W2PPG7 69 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TPP1O14773 563 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 AKAP10O43572 662 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 OR2B3O76000 313 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 FKBP9O95302 570 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 PEX11BO96011 259 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 FUCA1P04066 466 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 SHBGP04278 402 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 KLK3P07288 261 aaPredicted RBP6.82□□□□□ -1.32
USP1-202ENST00000371146 POU2F2P09086 479 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 CKMT2P17540 419 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 M6PRP20645 277 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 GGT5P36269 586 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 PRKAG1P54619 331 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 RELQ04864 619 aaPredicted RBP6.82□□□□□ -1.32
USP1-202ENST00000371146 RALGDSQ12967 914 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 CLCA4Q14CN2 919 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 CSRP2Q16527 193 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 RNF220Q5VTB9 566 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TMEM154Q6P9G4 183 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 BMP8AQ7Z5Y6 402 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 RABEPKQ7Z6M1 372 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms