RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 KLK4Q9Y5K2 254 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 OR2A25A4D2G3 310 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ANKUB1A6NFN9 424 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 F8W8V4 182 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 EIF2S1P05198 315 aaKnown RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 VPS41P49754 854 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 KLC1Q07866 573 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 KCNJ11Q14654 390 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TCTE1Q5JU00 501 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 LRRC8BQ6P9F7 803 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 LRRC6Q86X45 466 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 AGGF1Q8N302 714 aaeCLIP12.56□□□□□ -0.4
RPF1-201ENST00000370654 PRELID2Q8N945 189 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TTC29Q8NA56 475 aaPredicted RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 PPFIBP2Q8ND30 876 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 GIMAP7Q8NHV1 300 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 STT3BQ8TCJ2 826 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 THOC3Q96J01 351 aaKnown RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 PKP4Q99569 1192 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 WDR77Q9BQA1 342 aaPredicted RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 DPH7Q9BTV6 452 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 BFARQ9NZS9 450 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 SOX13Q9UN79 622 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 MED16Q9Y2X0 877 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 CROCCQ5TZA2 2017 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 H0YGG7 62 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 E2F3O00716 465 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 IGHEP01854 428 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 CELA2AP08217 269 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 ZGLP1P0C6A0 271 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 ERGP11308 486 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 ARF3P61204 181 aaPredicted RBP12.55□□□□□ -0.4
RPF1-201ENST00000370654 RBBP7Q16576 425 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 HKDC1Q2TB90 917 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 KLHL38Q2WGJ6 581 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 YOD1Q5VVQ6 348 aaPredicted RBP12.55□□□□□ -0.4
RPF1-201ENST00000370654 TTC27Q6P3X3 843 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 TTC23LQ6PF05 361 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 LINC00696Q6ZRV3 163 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 GSTA5Q7RTV2 222 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 CAND1Q86VP6 1230 aaKnown RBP12.55□□□□□ -0.4
RPF1-201ENST00000370654 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 UBE2Q2Q8WVN8 375 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 CRB3Q9BUF7 120 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 RAB11FIP5Q9BXF6 653 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 MRM3Q9HC36 420 aaKnown RBP12.55□□□□□ -0.4
RPF1-201ENST00000370654 ZNF160Q9HCG1 818 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 ZNF304Q9HCX3 659 aa12.55□□□□□ -0.4
RPF1-201ENST00000370654 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 P2RX6O15547 441 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 CEP104O60308 925 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 SRPX2O60687 465 aaPredicted RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 PSIP1O75475 530 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 IPO13O94829 963 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 STATHP02808 62 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 TPSB2P20231 275 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 CHRM3P20309 590 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 DCTP40126 519 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 CLCN7P51798 805 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 SRSF11Q05519 484 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 CUL1Q13616 776 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 TPSAB1Q15661 275 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 SYT16Q17RD7 645 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 FAM214AQ32MH5 1076 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 AGAP7PQ5VUJ5 663 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 ATG9BQ674R7 924 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 ZNF549Q6P9A3 640 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PLD3Q8IV08 490 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 DENND6AQ8IWF6 608 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 AMER3Q8N944 861 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 OR9A1PQ8NGU1 263 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 GSDMBQ8TAX9 411 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PPP4R1Q8TF05 950 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PSMF1Q92530 271 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 NACC2Q96BF6 587 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 AGAP4Q96P64 663 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 PLCD4Q9BRC7 762 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 LHPPQ9H008 270 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
RPF1-201ENST00000370654 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
RPF1-201ENST00000370654 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 MYO1CO00159 1063 aa12.53□□□□□ -0.4
RPF1-201ENST00000370654 KPNA5O15131 536 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms