RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 BUD31P41223 144 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 BLKP51451 505 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CBX3Q13185 183 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RUNX3Q13761 415 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DUOXA1Q1HG43 343 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC26Q2I0M4 334 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CXorf57Q6NSI4 855 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GAREM2Q75VX8 874 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 TSPAN33Q86UF1 283 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 KBTBD6Q86V97 674 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF614Q8N883 585 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ARL10Q8N8L6 244 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CANT1Q8WVQ1 401 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC5A11Q8WWX8 675 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 Q96MT0 163 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ATOH8Q96SQ7 321 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CRISPLD1Q9H336 500 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PALMDQ9NP74 551 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DDX28Q9NUL7 540 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PCDHGB3Q9Y5G1 929 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PRRC2BQ5JSZ5 2229 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ARID2Q68CP9 1835 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NUP205Q92621 2012 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 HMX2A2RU54 273 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GRXCR2A6NFK2 248 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CCDC85CA6NKD9 419 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PTGES3LE9PB15 166 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CBFA2T3O75081 653 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 EEDO75530 441 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ACP5P13686 325 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 JUPP14923 745 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NCK1P16333 377 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 TNNI3P19429 210 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 BDKRB1P46663 353 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CLCNKAP51800 687 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DGKQP52824 942 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RPS21P63220 83 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SPIBQ01892 262 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ACVR1Q04771 509 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CBLBQ13191 982 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GRB7Q14451 532 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 MFSD4BQ5TF39 518 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 OR52E8Q6IFG1 317 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NEK5Q6P3R8 708 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GALNT18Q6P9A2 607 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC2A7Q6PXP3 512 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 TMIGD1Q6UXZ0 262 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PDSS2Q86YH6 399 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C2orf73Q8N5S3 287 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C1orf52Q8N6N3 182 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CHST14Q8NCH0 376 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PIH1D2Q8WWB5 315 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NRG4Q8WWG1 115 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PHF12Q96QT6 1004 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 P2RY13Q9BPV8 354 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 OSBPL10Q9BXB5 764 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 LINC00597Q9H2U6 94 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 COQ10BQ9H8M1 238 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CAPN10Q9HC96 672 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPS30Q9NP92 439 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SDR39U1Q9NRG7 319 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 HCFC1R1Q9NWW0 138 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CIDEBQ9UHD4 219 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DAPK2Q9UIK4 370 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RAB23Q9ULC3 237 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CNOT6Q9ULM6 557 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PRSS51A0A1B0GVH4 220 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CLIC1O00299 241 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC28A2O43868 658 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 UGDHO60701 494 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 KCNJ13O60928 360 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RASGRP1O95267 797 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 EIF2S1P05198 315 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PRSS56P0CW18 603 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 HOXB2P14652 356 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PSMB9P28065 219 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PREPP48147 710 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RFX3P48380 749 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CDKN1CP49918 316 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C1QTNF8P60827 252 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NTHL1P78549 312 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NCF4Q15080 339 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C5orf22Q49AR2 442 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GPAT3Q53EU6 434 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 TJAP1Q5JTD0 557 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SPANXN4Q5MJ08 99 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 C9orf64Q5T6V5 341 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 DPPA4Q7L190 304 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ERMP1Q7Z2K6 904 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 THAP5Q7Z6K1 395 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 RGL4Q8IZJ4 473 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 GJD3Q8N144 294 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 OXR1Q8N573 874 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 AVL9Q8NBF6 648 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF784Q8NCA9 323 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 OR10G6Q8NH81 332 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 PNPT1Q8TCS8 783 aaKnown RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 HCAR2Q8TDS4 363 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SETD7Q8WTS6 366 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms