RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 AGTRAPQ6RW13 159 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 MCATQ8IVS2 390 aaKnown RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 IFT20Q8IY31 132 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF285Q96NJ3 590 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 ACSS3Q9H6R3 686 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 ACTR5Q9H9F9 607 aaPredicted RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 GPN2Q9H9Y4 310 aaPredicted RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 MRPS30Q9NP92 439 aaKnown RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 CROTQ9UKG9 612 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 NOVA2Q9UNW9 492 aaKnown RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 HMX2A2RU54 273 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 NPEPPSL1A6NEC2 478 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 OR2B3O76000 313 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 ACSL3O95573 720 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 PHBP35232 272 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 GCGRP47871 477 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 SLC12A2P55011 1212 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF425Q6IV72 752 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 LCN10Q6JVE6 187 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 RNF44Q7L0R7 432 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 DSELQ8IZU8 1212 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 N4BP2L2Q92802 583 aaPredicted RBP21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 SLC45A3Q96JT2 553 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 ATG10Q9H0Y0 220 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 SYNPO2LQ9H987 977 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 ENAMQ9NRM1 1142 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 PCMTD2Q9NV79 361 aa21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 RALYQ9UKM9 306 aaKnown RBP21.52■■□□□ 1.04
ECHDC1-203ENST00000368291 ENO2P09104 434 aaPredicted RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CCNYL3P0C7X3 344 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 STMN1P16949 149 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 DLSTP36957 453 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 GMPRP36959 345 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 AP1S2P56377 157 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 RAB10P61026 200 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 NAE1Q13564 534 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 COL9A2Q14055 689 aaPredicted RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 ZC3H12BQ5HYM0 836 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 ZNF385CQ66K41 422 aaPredicted RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 FRMPD2BQ6IN97 320 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 FBXO42Q6P3S6 717 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 PAQR7Q86WK9 346 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 GPR135Q8IZ08 494 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 SPATA6LQ8N4H0 392 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CT55Q8WUE5 264 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 MRRFQ96E11 262 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 TSPAN17Q96FV3 270 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 UBXN10Q96LJ8 280 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 RUFY1Q96T51 708 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CYTH2Q99418 400 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 PLCD4Q9BRC7 762 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 SGPP1Q9BX95 441 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 UNKQ9C0B0 810 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 DERL2Q9GZP9 239 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CCDC177Q9NQR7 707 aaPredicted RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 ABCF3Q9NUQ8 709 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CUEDC1Q9NWM3 386 aaPredicted RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 ARL15Q9NXU5 204 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 UTP6Q9NYH9 597 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 SH2B3Q9UQQ2 575 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 MRPS18BQ9Y676 258 aaKnown RBP21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 ZFYVE26Q68DK2 2539 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 CHD6Q8TD26 2715 aa21.51■■□□□ 1.03
ECHDC1-203ENST00000368291 MEN1O00255 615 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 GUCA1CO95843 209 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 HIST1H2AGP0C0S8 130 aaPredicted RBP21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 TCN2P20062 427 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 HIST1H2ADP20671 130 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 TSNQ15631 228 aaKnown RBP21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 CMC1Q7Z7K0 106 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 ZNF655Q8N720 491 aaPredicted RBP21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 OR56A3Q8NH54 315 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 KIAA1143Q96AT1 154 aaPredicted RBP21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 FBXL8Q96CD0 374 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 CLIP3Q96DZ5 547 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 HIST1H2AHQ96KK5 128 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 HIST1H2AJQ99878 128 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 H2AFJQ9BTM1 129 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 TRIM54Q9BYV2 358 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 ANKMY1Q9P2S6 941 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 FAM208BQ5VWN6 2430 aa21.5■■□□□ 1.03
ECHDC1-203ENST00000368291 LOC105369274A0A096LPK9 316 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 LOC102723532A0A0G2JNH3 316 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 A0A0J9YVX5 310 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 ZSCAN9O15535 394 aaPredicted RBP21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 CCNDBP1O95273 360 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 FAM153BP0C7A2 387 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 CCDC166P0CW27 439 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 CSRP3P50461 194 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 CYP4F2P78329 520 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 ABATP80404 500 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 NAA25Q14CX7 972 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 FAM153CQ494X1 144 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 THEMIS2Q5TEJ8 643 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 PRAMEF13Q5VWM6 474 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 RHBDD2Q6NTF9 364 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 TLDC1Q6P9B6 456 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 OR4N4Q8N0Y3 316 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 MR1Q95460 341 aa21.49■■□□□ 1.03
ECHDC1-203ENST00000368291 MED8Q96G25 268 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms