RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PDGFRLQ15198 375 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 KCNA10Q16322 511 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 METAP1DQ6UB28 335 aaPredicted RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 GDPD4Q6W3E5 623 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 CYP4V2Q6ZWL3 525 aaPredicted RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 SIDT2Q8NBJ9 832 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 FBXO15Q8NCQ5 510 aaPredicted RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 INPP5EQ9NRR6 644 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 IFT52Q9Y366 437 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 TNS1Q9HBL0 1735 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 KRT87PA6NCN2 255 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 UPK3BL1B0FP48 263 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 UPK3BL2E5RIL1 263 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 PTGESO14684 152 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ACOT8O14734 319 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 SLC16A6O15403 523 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 SERPINI2O75830 405 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ACADMP11310 421 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 RHCEP18577 417 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 CMPK1P30085 196 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 NUDT1P36639 197 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ZNF461Q8TAF7 563 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 NRG4Q8WWG1 115 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 KLHL6Q8WZ60 621 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ATOH8Q96SQ7 321 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 C7orf50Q9BRJ6 194 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 COPS4Q9BT78 406 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ZDHHC6Q9H6R6 413 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 SMOXQ9NWM0 555 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ENPP5Q9UJA9 477 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ACSL5Q9ULC5 683 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 MRPS33Q9Y291 106 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 YIPF1Q9Y548 306 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 HAT1O14929 419 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 PRKAR2AP13861 404 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 ZNF763Q0D2J5 394 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 NFATC2Q13469 925 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 FAM174BQ3ZCQ3 159 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 USP39Q53GS9 565 aaKnown RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 CLEC6AQ6EIG7 209 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 KIAA1211LQ6NV74 962 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 TRIM46Q7Z4K8 759 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ADGRG5Q8IZF4 528 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 OR4F6Q8NGB9 312 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 SUSD6Q92537 303 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 NT5DC2Q9H857 520 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ANKRA2Q9H9E1 313 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 PAK1IP1Q9NWT1 392 aaPredicted RBP7.11□□□□□ -1.27
VTA1-202ENST00000367630 DKK3Q9UBP4 350 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 CEPT1Q9Y6K0 416 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 ZNF780BQ9Y6R6 833 aa7.11□□□□□ -1.27
VTA1-202ENST00000367630 C2orf71A6NGG8 1288 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 MSI1O43347 362 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 SLC35G4P0C7Q5 338 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 WNT7BP56706 349 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 VMACQ2NL98 169 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ALG11Q2TAA5 492 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ZNF404Q494X3 552 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 TPD52L3Q96J77 140 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 KLHL5Q96PQ7 755 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 REEP4Q9H6H4 257 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 GPN1Q9HCN4 374 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 COPZ2Q9P299 210 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PCDHA9Q9Y5H5 950 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 EFCAB9A8MZ26 197 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CLIC1O00299 241 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 IDH3BO43837 385 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FADS2O95864 444 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 SMSP52788 366 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CHIT1Q13231 466 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PPIGQ13427 754 aaKnown RBP eCLIP7.1□□□□□ -1.27
VTA1-202ENST00000367630 XKR7Q5GH72 579 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FAM174AQ8TBP5 190 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 UTP15Q8TED0 518 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 PELOQ9BRX2 385 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 C6orf62Q9GZU0 229 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 HHLA1C9JL84 531 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 TOR1BO14657 336 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 SNPHO15079 494 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 AKAP8O43823 692 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 GPR1P46091 355 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CCR8P51685 355 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 SCARB2Q14108 478 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 RUNDC3AQ59EK9 446 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PIK3R6Q5UE93 754 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PIWIL3Q7Z3Z3 882 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 ATAD1Q8NBU5 361 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 OR10G2Q8NGC3 310 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 RGMAQ96B86 450 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 DCUN1D5Q9BTE7 237 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 BTBD1Q9H0C5 482 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 DCAF13Q9NV06 445 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 PPT2Q9UMR5 302 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms