RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PJA1Q8NG27 643 aa11.99□□□□□ -0.49
PTPN7-202ENST00000367279 PPP1R14BQ96C90 147 aa11.99□□□□□ -0.49
PTPN7-202ENST00000367279 SH3YL1Q96HL8 342 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-202ENST00000367279 SMG9Q9H0W8 520 aaKnown RBP11.99□□□□□ -0.49
PTPN7-202ENST00000367279 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN7-202ENST00000367279 SH3BP1Q9Y3L3 701 aa11.99□□□□□ -0.49
PTPN7-202ENST00000367279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 OR2AG2A6NM03 316 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 OR56A5P0C7T3 313 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 GABARAPL2P60520 117 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 POM121L1PQ3SYA9 428 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 DGKKQ5KSL6 1271 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 PLD3Q8IV08 490 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 KLHL23Q8NBE8 558 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF461Q8TAF7 563 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 FAR1Q8WVX9 515 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MYLIPQ8WY64 445 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 USP7Q93009 1102 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MRPL9Q9BYD2 267 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 REEP1Q9H902 201 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 POLE4Q9NR33 117 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 THG1LQ9NWX6 298 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 UGT2B11O75310 529 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 PRPS2P11908 318 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 IMPDH2P12268 514 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 PSMA3P25788 255 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MAPK1P28482 360 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 NRIP1P48552 1158 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 VLDLRP98155 873 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 LMAN2Q12907 356 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 INAQ16352 499 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SYT16Q17RD7 645 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 RFX4Q33E94 735 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 XKR6Q5GH73 641 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SLC8B1Q6J4K2 584 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 NOXRED1Q6NXP6 359 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 NEK5Q6P3R8 708 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MACC1Q6ZN28 852 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF551Q7Z340 670 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 P2RY8Q86VZ1 359 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ELMO1Q92556 727 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 RPL3LQ92901 407 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 FKBP10Q96AY3 582 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF641Q96N77 438 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 APOL4Q9BPW4 351 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SLC29A3Q9BZD2 475 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 CFAP97Q9P2B7 532 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 LSM7Q9UK45 103 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 INTS6Q9UL03 887 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 CCNDBP1O95273 360 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 EPORP19235 508 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 CLK3P49761 638 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 EIF2B2P49770 351 aaKnown RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 CD300CQ08708 224 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 LYPLAL1Q5VWZ2 237 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 Q6ZPB1 254 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 FOXJ1Q92949 421 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MAL2Q969L2 176 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SH3KBP1Q96B97 665 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 ZDHHC3Q9NYG2 299 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 SH3BP4Q9P0V3 963 aa11.98□□□□□ -0.49
PTPN7-202ENST00000367279 MAGEB17A8MXT2 336 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 KPNA4O00629 521 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 WNT9AO14904 365 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 OPN1SWP03999 348 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 ITIH1P19827 911 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 PBLDP30039 288 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 RXRGP48443 463 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 CLK1P49759 484 aaKnown RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 ST13P50502 369 aaKnown RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 CTF1Q16619 201 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 ADPRMQ3LIE5 342 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 GPR33Q49SQ1 333 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 FRG2Q64ET8 278 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 SHQ1Q6PI26 577 aaKnown RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 PAGE2Q7Z2X7 111 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 BBS7Q8IWZ6 715 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 OR52J3Q8NH60 311 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 FRG2BQ96QU4 278 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF347Q96SE7 839 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 P2RY13Q9BPV8 354 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 TRIT1Q9H3H1 467 aaKnown RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 MAGIXQ9H6Y5 334 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 PLXNA4Q9HCM2 1894 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 GOLGA4Q13439 2230 aaKnown RBP11.97□□□□□ -0.49
PTPN7-202ENST00000367279 RGS10O43665 173 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 LCKP06239 509 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 NUDT7P0C024 238 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 TNFRSF1BP20333 461 aa11.97□□□□□ -0.49
PTPN7-202ENST00000367279 GABRR2P28476 465 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms