RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PRPS1L1P21108 318 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 CBSP35520 551 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 RBM34P42696 430 aaKnown RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ARPC4P59998 168 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 MRPL49Q13405 166 aaKnown RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 IQCCQ4KMZ1 466 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 TAC3Q9UHF0 121 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 UTS2RQ9UKP6 389 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 R3HDM2Q9Y2K5 976 aaKnown RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 PPEF2O14830 753 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 PRKCGP05129 697 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ATP1B2P14415 290 aaPredicted RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 NCK1P16333 377 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 EIF2S3LQ2VIR3 472 aaKnown RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 OR52E4Q8NGH9 312 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 BORCS8Q96FH0 119 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 HBEGFQ99075 208 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 VPS29Q9UBQ0 182 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 RCCD1A6NED2 376 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 MYCLP1P12525 358 aaPredicted RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ANXA8P13928 327 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 FAM149AA5PLN7 773 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 RCBTB2O95199 551 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 CRB2Q5IJ48 1285 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 SLC25A25Q6KCM7 469 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 USP43Q70EL4 1123 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF460Q14592 562 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 C1orf189Q5VU69 101 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF280BQ86YH2 543 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 ACTL8Q9H568 366 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 PDE10AQ9Y233 779 aa15.34■□□□□ 0.05
NUCKS1-201ENST00000367142 RAP2AP10114 183 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 ACSL1P33121 698 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 RABGGTBP53611 331 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 SEMG2Q02383 582 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 C6orf52Q5T4I8 152 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 ANO7Q6IWH7 933 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 KIAA1161Q6NSJ0 714 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 CLIP4Q8N3C7 705 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 C15orf40Q8WUR7 153 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 MR1Q95460 341 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 TCEAL3Q969E4 200 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 ZFP3Q96NJ6 502 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 NMUR2Q9GZQ4 415 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 CTPS2Q9NRF8 586 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 RDH8Q9NYR8 311 aa15.33■□□□□ 0.05
NUCKS1-201ENST00000367142 UPK3BL1B0FP48 263 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 UPK3BL2E5RIL1 263 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 TGFB1P01137 390 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 RORCP51449 518 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 HYAL2Q12891 473 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 OR5M3Q8NGP4 307 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 METTL8Q9H825 291 aaKnown RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 OR2AT4A6NND4 320 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 C9JVG2 144 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 E7ENX8 843 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 HAS3O00219 553 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 MAP2K7O14733 419 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 MAGP20916 626 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 CCNOP22674 350 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 OR12D2P58182 307 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 VWA5B1Q5TIE3 1220 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 CMTR2Q8IYT2 770 aaKnown RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 AUTS2Q8WXX7 1259 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 ERMAPQ96PL5 475 aaPredicted RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 NPLQ9BXD5 320 aaPredicted RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 ANKRA2Q9H9E1 313 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 AASSQ9UDR5 926 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 C9IYK1 514 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 AHSA1O95433 338 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 ITGA5P08648 1049 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 CD48P09326 243 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 SEPHS1P49903 392 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 GJA9P57773 515 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF782Q6ZMW2 699 aaPredicted RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 LRRC69Q6ZNQ3 347 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 FCRL5Q96RD9 977 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 USP29Q9HBJ7 922 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 SSU72Q9NP77 194 aaKnown RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 KCND1Q9NSA2 647 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 BAIAP2Q9UQB8 552 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 DNMT3AQ9Y6K1 912 aaPredicted RBP15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 YJEFN3A6XGL0 299 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 H3BNX3 289 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 SLURP2P0DP57 97 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 GLP1RP43220 463 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 FOXK1P85037 733 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 MADCAM1Q13477 382 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 SQORQ9Y6N5 450 aa15.33■□□□□ 0.04
NUCKS1-201ENST00000367142 PLOD2O00469 737 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 HCKP08631 526 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 PLP2Q04941 152 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 PDCD4Q53EL6 469 aaKnown RBP15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 DEFB119Q8N690 84 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF781Q8N8C0 355 aa15.32■□□□□ 0.04
NUCKS1-201ENST00000367142 OR10G2Q8NGC3 310 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms