RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TNPO3Q9Y5L0 923 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 ITGA2P17301 1181 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 RNASEH2BQ5TBB1 312 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 PDZD9Q8IXQ8 264 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 RDH11Q8TC12 318 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 AOC1P19801 751 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 AXLP30530 894 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 C3orf33Q6P1S2 294 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 PNCKQ6P2M8 343 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 MFSD3Q96ES6 412 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZNF70Q9UC06 446 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 CORO2BQ9UQ03 480 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 KCNIP3Q9Y2W7 256 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 URADA6NGE7 173 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 DNAJB5O75953 348 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 CHRNA1P02708 482 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 NR2F6P10588 404 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 MYF6P23409 242 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZNF484Q5JVG2 852 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 QSOX2Q6ZRP7 698 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 PRSS58Q8IYP2 241 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 TWIST2Q8WVJ9 160 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 NAA50Q9GZZ1 169 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 ENPP5Q9UJA9 477 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 TPST2O60704 377 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 PEPDP12955 493 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 MAP2K3P46734 347 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 PRKCDQ05655 676 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 CLPPQ16740 277 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 C12orf45Q8N5I9 185 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR10A6Q8NH74 314 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 SNX33Q8WV41 574 aa10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 DHX33Q9H6R0 707 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-205ENST00000366769 MLYCDO95822 493 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SPATS1Q496A3 300 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 IQCCQ4KMZ1 466 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 ADAMTS16Q8TE57 1224 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 RTFDC1Q9BY42 306 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 RNF19AQ9NV58 838 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CPA4Q9UI42 421 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 F8W036 122 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SNRPFP62306 86 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 BLOC1S1P78537 153 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 C1orf216Q8TAB5 229 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 RIPOR3Q96MK2 946 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 MROH1Q8NDA8 1641 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 K7EPK0 472 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 KIAA0513O60268 411 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 VSX2P58304 361 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SAMD14Q8IZD0 417 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 XRN1Q8IZH2 1706 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM71E2Q8N5Q1 922 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR5K1Q8NHB7 308 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CCDC74BQ96LY2 380 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 PANX1Q96RD7 426 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 IMP3Q9NV31 184 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FETUBQ9UGM5 382 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TNFRSF11BO00300 401 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBL1XO60907 577 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TSHRP16473 764 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GTF2IRD2BQ6EKJ0 949 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CDC42EP5Q6NZY7 148 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GTF2IRD2Q86UP8 949 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GATA6Q92908 595 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 AP2M1Q96CW1 435 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 ARL5BQ96KC2 179 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZNF597Q96LX8 424 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 POLEQ07864 2286 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GJA5P36382 358 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FBXO43Q4G163 708 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 PLEKHH3Q7Z736 793 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC7A6OSQ96CW6 309 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 B3GNT4Q9C0J1 378 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 DNAJC27Q9NZQ0 273 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR3A3P47888 321 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CPSF6Q16630 551 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SMARCD3Q6STE5 483 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GRAMD2AQ8IUY3 354 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 CPT1CQ8TCG5 803 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SMURF2Q9HAU4 748 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 DLGAP1O14490 977 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 DDCP20711 480 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 NT5EP21589 574 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GSTM2P28161 218 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 PKLRP30613 574 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SIRPGQ9P1W8 387 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TRBV23OR9-2A0A075B6M9 112 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3DA0A087WVF3 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3IA0A087WXS9 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3EA0A087X179 549 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms