RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 GRK3P35626 688 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FOLR3P41439 243 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 GRIA3P42263 894 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 CDKN2DP55273 166 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 AP1S2P56377 157 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 TBPL1P62380 186 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 DCDP81605 110 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 KCNAB2Q13303 367 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FASTKD3Q14CZ7 662 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 NCF4Q15080 339 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ZIC1Q15915 447 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 UGT8Q16880 541 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FAM214AQ32MH5 1076 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 PTCHD3Q3KNS1 767 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 RBM20Q5T481 1227 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 PRAMEF13Q5VWM6 474 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ICE2Q659A1 982 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 RHBDD2Q6NTF9 364 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FAM199XQ6PEV8 388 aaPredicted RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 TRMT10BQ6PF06 316 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 SUSD1Q6UWL2 747 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ZNF572Q7Z3I7 529 aaPredicted RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 CTAGE6Q86UF2 777 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 MCATQ8IVS2 390 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 IGDCC3Q8IVU1 814 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 CTAGE4Q8IX94 777 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 CTAGE3PQ8IX95 158 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 NKAPQ8N5F7 415 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 KIF18AQ8NI77 898 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ATL1Q8WXF7 558 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 THAP4Q8WY91 577 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 CCDC138Q96M89 665 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 PKP4Q99569 1192 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 SLC30A3Q99726 388 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ZFYVE21Q9BQ24 234 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 DPH7Q9BTV6 452 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FAM129AQ9BZQ8 928 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 PARVBQ9HBI1 364 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FAM60AQ9NP50 221 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 ARL15Q9NXU5 204 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 IFT80Q9P2H3 777 aaPredicted RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 TUBD1Q9UJT1 453 aa8.95□□□□□ -0.98
MRPL55-216ENST00000366744 FARSAQ9Y285 508 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 GCN1Q92616 2671 aaKnown RBP8.95□□□□□ -0.98
MRPL55-216ENST00000366744 A0A0J9YVX5 310 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 GFYI3L273 518 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 TXNDC9O14530 226 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 DSCR3O14972 297 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 SRPX2O60687 465 aaPredicted RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RECKO95980 971 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 EIF2S1P05198 315 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ITGAXP20702 1163 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ALAS2P22557 587 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 FDXRP22570 491 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 HRH2P25021 359 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 PHBP35232 272 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RORAP35398 523 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RRADP55042 308 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 VSX2P58304 361 aaPredicted RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RPS18P62269 152 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 NAB1Q13506 487 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 SLMAPQ14BN4 828 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ATP1A1-AS1Q5TC04 95 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 C1orf189Q5VU69 101 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 MLIPQ5VWP3 458 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 DUPD1Q68J44 220 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 CAPN13Q6MZZ7 669 aaPredicted RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 PAQR3Q6TCH7 311 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 FAM198BQ6UWH4 519 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 TTLL10Q6ZVT0 673 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RNF44Q7L0R7 432 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ADAMTSL2Q86TH1 951 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ZC3HC1Q86WB0 502 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 FAM20CQ8IXL6 584 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 DNAJC22Q8N4W6 341 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 PPFIBP2Q8ND30 876 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 OR2A1Q8NGT9 310 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 C9orf43Q8TAL5 461 aaPredicted RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ZNF480Q8WV37 535 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 EEF1AKMT1Q8WVE0 214 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 FKBP10Q96AY3 582 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ALKBH8Q96BT7 664 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 VPS50Q96JG6 964 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 CABS1Q96KC9 395 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 WDR83Q9BRX9 315 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 HAUS8Q9BT25 410 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 TSPYL1Q9H0U9 437 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 RHOJQ9H4E5 214 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 POPDC3Q9HBV1 291 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 GPAMQ9HCL2 828 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 ACSS2Q9NR19 701 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 CUTCQ9NTM9 273 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 DHCR7Q9UBM7 475 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 NXT1Q9UKK6 140 aaKnown RBP8.94□□□□□ -0.98
MRPL55-216ENST00000366744 TCFL5Q9UL49 500 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 MED16Q9Y2X0 877 aa8.94□□□□□ -0.98
MRPL55-216ENST00000366744 VWA7Q9Y334 891 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms