RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 GRAMD1AQ96CP6 724 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 R3HDM4Q96D70 268 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 PPP1R16AQ96I34 528 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 RBM41Q96IZ5 413 aaKnown RBP7.73□□□□□ -1.17
YBX3-204ENST00000366290 OLFM3Q96PB7 478 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ALS2CR12Q96Q35 445 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 ALG8Q9BVK2 526 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 OSBPL8Q9BZF1 889 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 PDFQ9HBH1 243 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 FSCN3Q9NQT6 498 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 EHD3Q9NZN3 535 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 DKK3Q9UBP4 350 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 RIMKLBQ9ULI2 386 aa7.73□□□□□ -1.17
YBX3-204ENST00000366290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
YBX3-204ENST00000366290 FASNP49327 2511 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3DA0A087WVF3 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3IA0A087WXS9 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3EA0A087X179 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3KA0A087X1G2 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 A0A1B0GVT2 93 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 A0A1W2PR77 199 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3FA6NER0 549 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3LB9A6J9 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 J3KR12 359 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 PLK4O00444 970 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 KPNA3O00505 521 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 PCDH17O14917 1159 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 KIF5CO60282 957 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 CST8O60676 142 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 PRAMEF11O60813 436 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 CBFA2T3O75081 653 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TMCC1O94876 653 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 POP4O95707 220 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 VIPP01282 170 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 WNT1P04628 370 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 FESP07332 822 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 IL6RP08887 468 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3HP0C7X1 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 ADRB3P13945 408 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 RBL1P28749 1068 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 LIPAP38571 399 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 FOLR3P41439 243 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 CSNK1DP48730 415 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 PAPOLAP51003 745 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 SNRPD1P62314 119 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 GALNT2Q10471 571 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 FOXO1Q12778 655 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 FHL3Q13643 280 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 MYLK3Q32MK0 819 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 C4orf46Q504U0 113 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 SETMARQ53H47 684 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 ZNF805Q5CZA5 627 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 KAZNQ674X7 775 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3GQ6DHY5 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3CQ6IPX1 549 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 NAPEPLDQ6IQ20 393 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 Q6ZNX1 250 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 BBS12Q6ZW61 710 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 GLRX5Q86SX6 157 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 CAND1Q86VP6 1230 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 HORMAD1Q86X24 394 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 RFX6Q8HWS3 928 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 RASGRP3Q8IV61 690 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 TBC1D3Q8IZP1 549 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 UBL4BQ8N7F7 174 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 ABHD5Q8WTS1 349 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 RAB7BQ96AH8 199 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 ARRDC3Q96B67 414 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 GTPBP2Q9BX10 602 aaKnown RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 HEMGNQ9BXL5 484 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 CARD9Q9H257 536 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 SLC32A1Q9H598 525 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 GAREM1Q9H706 876 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 ERVMER34-1Q9H9K5 563 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 JRKLQ9Y4A0 524 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 COL5A1P20908 1838 aaPredicted RBP7.72□□□□□ -1.17
YBX3-204ENST00000366290 LOC400499M0QZD8 3231 aa7.72□□□□□ -1.17
YBX3-204ENST00000366290 LRRK1Q38SD2 2015 aa7.71□□□□□ -1.17
YBX3-204ENST00000366290 ACACAQ13085 2346 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 TSPAN11A1L157 253 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 FAM47DPA6NHR8 397 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 ARHGAP42A6NI28 874 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 C16orf96A6NNT2 1141 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 PRAMEF26H0Y7S4 382 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 DFFAO00273 331 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 MPPED1O15442 326 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 MAKP20794 623 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 TGM2P21980 687 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 CD38P28907 300 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 CXCR5P32302 372 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 SERPINB6P35237 376 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 GARSP41250 739 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 NOVA1P51513 510 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 SUOXP51687 545 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 GNG11P61952 73 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 DYNLT1P63172 113 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 RFTN1Q14699 578 aaPredicted RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 CYTH1Q15438 398 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 SIX1Q15475 284 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms