RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NEMP1O14524 444 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ZNF195O14628 629 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 YY2O15391 372 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 TSPAN6O43657 245 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 RECQL5O94762 991 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CHRNGP07510 517 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ENO3P13929 434 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 POU3F2P20265 443 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 MSH3P20585 1137 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 AOAHP28039 575 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 AKT1P31749 480 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 RPL14P50914 215 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ZFP36L1Q07352 338 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 UNC50Q53HI1 259 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 PLEKHS1Q5SXH7 462 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CYHR1Q6ZMK1 362 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 FRMD7Q6ZUT3 714 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 GPSM1Q86YR5 675 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 PHACTR4Q8IZ21 702 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 MYO1HQ8N1T3 1032 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ARL10Q8N8L6 244 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 PTGR2Q8N8N7 351 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 NUS1Q96E22 293 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 PHF21BQ96EK2 531 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 FAR2Q96K12 515 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CATSPER2Q96P56 530 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CMKLR1Q99788 373 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 B3GNT4Q9C0J1 378 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 LRRN3Q9H3W5 708 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 GSTO2Q9H4Y5 243 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 ACTR5Q9H9F9 607 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 CYP4F12Q9HCS2 524 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 NUDT4Q9NZJ9 180 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 HEY2Q9UBP5 337 aa10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-202ENST00000366216 SUPT3HB4E1H0 165 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MATN2O00339 956 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 HDAC3O15379 428 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 SGTAO43765 313 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 CCDC22O60826 627 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MMP20O60882 483 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 SUPT3HO75486 399 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 UBOX5O94941 541 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 SOD1P00441 154 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 FTH1P02794 183 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 RNF224P0DH78 156 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MPC1LP0DKB6 136 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 GFAPP14136 432 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 LIFP15018 202 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MPSTP25325 297 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ELAVL4P26378 380 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 CCR7P32248 378 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 UQCRFS1P47985 274 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 IDH3AP50213 366 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ALDH18A1P54886 795 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 PFN3P60673 137 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 BNIP1Q12981 228 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 AGERQ15109 404 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 TCEA2Q15560 299 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 PFKFB4Q16877 469 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ACSBG2Q5FVE4 666 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 FHL5Q5TD97 284 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 TMEM164Q5U3C3 297 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 EPGNQ6UW88 154 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 NEK10Q6ZWH5 1172 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MAVSQ7Z434 540 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MTDHQ86UE4 582 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 PHYKPLQ8IUZ5 450 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 AFAP1L2Q8N4X5 818 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 NKD1Q969G9 470 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 PMEPA1Q969W9 287 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ERP27Q96DN0 273 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 LENG8Q96PV6 779 aaPredicted RBP10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 TUBB6Q9BUF5 446 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 MYLK2Q9H1R3 596 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 RDH14Q9HBH5 336 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 ZDHHC2Q9UIJ5 367 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 CNOT6Q9ULM6 557 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 DOLKQ9UPQ8 538 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 OARD1Q9Y530 152 aa10.91□□□□□ -0.66
CSNK1E-202ENST00000366216 A1L4Q6 167 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 IGLON5A6NGN9 336 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 NUAK1O60285 661 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 ATP5HO75947 161 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SUPT7LO94864 414 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 RPS17P08708 135 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 GSTM1P09488 218 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TEAD1P28347 426 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SERPINB3P29508 390 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 GPR1P46091 355 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 PRLHRP49683 370 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 HK3P52790 923 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 THOP1P52888 689 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 GSTM4Q03013 218 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TMEM115Q12893 351 aaPredicted RBP10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 KLRB1Q12918 225 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 SGCGQ13326 291 aa10.9□□□□□ -0.66
CSNK1E-202ENST00000366216 TUBB3Q13509 450 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms