RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZNF542PQ5EBM4 170 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
CTR9-201ENST00000361367 ZFRQ96KR1 1074 aaKnown RBP13.49□□□□□ -0.25
CTR9-201ENST00000361367 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 OSBPL11Q9BXB4 747 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 SUSD2Q9UGT4 822 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 EVPLQ92817 2033 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 OR5K4A6NMS3 321 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 ENO4A6NNW6 628 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 CXCR6O00574 342 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 SLC16A5O15375 505 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 CYP4B1P13584 511 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 JUNDP17535 347 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 CTGFP29279 349 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 CCR10P46092 362 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 ST13P50502 369 aaKnown RBP13.49□□□□□ -0.25
CTR9-201ENST00000361367 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
CTR9-201ENST00000361367 PTSQ03393 145 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 ZNF382Q96SR6 550 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 NELL2Q99435 816 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 BOCQ9BWV1 1114 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 LRRC3Q9BY71 257 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 LMAN1LQ9HAT1 526 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 APOBEC3BQ9UH17 382 aaKnown RBP13.49□□□□□ -0.25
CTR9-201ENST00000361367 SCML1Q9UN30 329 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
CTR9-201ENST00000361367 DOCK2Q92608 1830 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 A8MUI8 341 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 ZNF217O75362 1048 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 FGF3P11487 239 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 TOP3AQ13472 1001 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 HERC3Q15034 1050 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 NADSYN1Q6IA69 706 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 MAP1BP46821 2468 aaKnown RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 hCG_2014768A0A024R1R8 64 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 KLHL33A6NCF5 533 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 IL7RP16871 459 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 SERPINB1P30740 379 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 KHKP50053 298 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 CASP9P55211 416 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 DLG1Q12959 904 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 EPGNQ6UW88 154 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 PEX5LQ8IYB4 626 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 PDP1Q9P0J1 537 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 AP4B1Q9Y6B7 739 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 A0A0U1RQS6 177 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 FAM149AA5PLN7 773 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 GBAP04062 536 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 SAGP10523 405 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 G6PDP11413 515 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 FDXRP22570 491 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 HOXD9P28356 352 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 IRS1P35568 1242 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 MPP2Q14168 576 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 HIPK1Q86Z02 1210 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 CLVS1Q8IUQ0 354 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 RPLP0P6Q8NHW5 317 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
CTR9-201ENST00000361367 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
CTR9-201ENST00000361367 C9J4A7 227 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 HHLA1C9JL84 531 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 MAN1A2O60476 641 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 OR6B1O95007 311 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 SFRP1Q8N474 314 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 ADCY4Q8NFM4 1077 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 OR52J3Q8NH60 311 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 RNFT2Q96EX2 444 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 POMPQ9Y244 141 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 DUXAA6NLW8 204 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 MCIDASD6RGH6 385 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CLIC1O00299 241 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 TNFRSF11BO00300 401 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 CD247P20963 164 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CSTF2P33240 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTR9-201ENST00000361367 TAS2R50P59544 299 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 PDK3Q15120 406 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 TAF13Q15543 124 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 ZNF540Q8NDQ6 660 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms