RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SERPINB9P50453 376 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 ISL1P61371 349 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 HOXC5Q00444 222 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 SURF1Q15526 300 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 GOLGA7BQ2TAP0 167 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 LAIR1Q6GTX8 287 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM180BQ6P0A1 224 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 NLGN4YQ8NFZ3 816 aaPredicted RBP9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 TMEM174Q8WUU8 243 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 DEPDC1BQ8WUY9 529 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 MBOAT4Q96T53 435 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 KLHL21Q9UJP4 597 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRHDEQ9UKU6 1024 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 RAB23Q9ULC3 237 aa9.08□□□□□ -0.96
SMARCAL1-202ENST00000358207 KPNA7A9QM74 516 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 B4DXG7 233 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 KHNYNO15037 678 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CNTN5O94779 1100 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SFTPCP11686 197 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 MYOGP15173 224 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 RPS3P23396 243 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ATXN1P54253 815 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 EPHA5P54756 1037 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 PLIN5Q00G26 463 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 POU5F1BQ06416 359 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 HYAL2Q12891 473 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CYP51A1Q16850 503 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 DCAF4L1Q3SXM0 396 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 FUT11Q495W5 492 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ARL13AQ5H913 290 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM102AQ5T9C2 384 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 TIGD3Q6B0B8 471 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 DNAJC24Q6P3W2 148 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SCYL2Q6P3W7 929 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 BNIPLQ7Z465 357 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SNX20Q7Z614 316 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ABI3BPQ7Z7G0 1075 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZDHHC13Q8IUH4 622 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR65Q8IYL9 337 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 OR9I1Q8NGQ6 314 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CNIH3Q8TBE1 160 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 RDH11Q8TC12 318 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LINC01599Q8WXQ3 324 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 MSLNLQ96KJ4 702 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR137Q96N19 417 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 C11orf84Q9BUA3 381 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CINPQ9BW66 212 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LDAHQ9H6V9 325 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ANAPC2Q9UJX6 822 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 FBXO10Q9UK96 956 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SPTBN5Q9NRC6 3674 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LCHNA4D1U4 455 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LOC110117498-PIK3R3F6TDL0 507 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CILPO75339 1184 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ECDO95905 644 aaPredicted RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CYP11A1P05108 521 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 OR4Q2P0C623 313 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ETV6P41212 452 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ALDH3A2P51648 485 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 KCNK10P57789 538 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LILRA4P59901 499 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CREMQ03060 361 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 STX5Q13190 355 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SMAD4Q13485 552 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 TAB1Q15750 504 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 AGKQ53H12 422 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM219BQ5XKK7 198 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 KDM4DQ6B0I6 523 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 LCN8Q6JVE9 175 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 CMC1Q7Z7K0 106 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 GALNT10Q86SR1 603 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAF2Q96CS3 445 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 APOL5Q9BWW9 433 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPATCH2LQ9NWQ4 482 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 RAP2CQ9Y3L5 183 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 V9GYQ6 96 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 COL4A2P08572 1712 aa9.07□□□□□ -0.96
SMARCAL1-202ENST00000358207 TCRBV5S2A0A599 114 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ANGPT2O15123 496 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ARPC2O15144 300 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PMM2O15305 246 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 INPP4BO15327 924 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SRP72O76094 671 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LDLRP01130 860 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 CSF2P04141 144 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 F7P08709 466 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GRK5P34947 590 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PTPN7P35236 360 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RECQLP46063 649 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GDI2P50395 445 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 CDC42EP1Q00587 391 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FADDQ13158 208 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 DAG1Q14118 895 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 DUSP6Q16828 381 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms