RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KBTBD7Q8WVZ9 684 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 SEC14L4Q9UDX3 406 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 OAZ3Q9UMX2 235 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TYROBPO43914 113 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 FBXO48Q5FWF7 155 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 CRB2Q5IJ48 1285 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 FRMD7Q6ZUT3 714 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 ABHD13Q7L211 337 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 LGI4Q8N135 537 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 PARP8Q8N3A8 854 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 ACOT12Q8WYK0 555 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TRNT1Q96Q11 434 aaKnown RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 PCDHAC1Q9H158 963 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 ABCG4Q9H172 646 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TVP23BQ9NYZ1 205 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 ZDHHC2Q9UIJ5 367 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 CDH7Q9ULB5 785 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 FZD4Q9ULV1 537 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 FABP12A6NFH5 140 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 TMEM150CB9EJG8 249 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 MANBAO00462 879 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 RFC2P35250 354 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 SEPHS1P49903 392 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 GDF6Q6KF10 455 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 ENDOVQ8N8Q3 282 aaKnown RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 LMO3Q8TAP4 145 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 OTUB2Q96DC9 234 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 CLCC1Q96S66 551 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 SLC35A5Q9BS91 424 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 NLE1Q9NVX2 485 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 MYH3P11055 1940 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 MYH11P35749 1972 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 UPK3BL1B0FP48 263 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF879B4DU55 563 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 UPK3BL2E5RIL1 263 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 SNAPC5O75971 98 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 RCBTB2O95199 551 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 RENP00797 406 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 H1F0P07305 194 aaKnown RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 HAPLN1P10915 354 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 ENGP17813 658 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 XKP51811 444 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 GBX2P52951 348 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 PCLAFQ15004 111 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 MYLK3Q32MK0 819 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 GPR153Q6NV75 609 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 LYSMD3Q7Z3D4 306 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 KLHL6Q8WZ60 621 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 ESAMQ96AP7 390 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 SMOQ99835 787 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 IFT27Q9BW83 186 aa11.46□□□□□ -0.58
COL9A1-202ENST00000357250 PPIEQ9UNP9 301 aaKnown RBP11.46□□□□□ -0.58
COL9A1-202ENST00000357250 EDDM13A0A1B0GTR0 161 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 DAPL1A0PJW8 107 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 RHPN2P1A8MT19 583 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 SIX3O95343 332 aaPredicted RBP11.45□□□□□ -0.58
COL9A1-202ENST00000357250 TBX18O95935 607 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 NR2C1P13056 603 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF823P16415 610 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 CD36P16671 472 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 EIF5AP63241 154 aaKnown RBP11.45□□□□□ -0.58
COL9A1-202ENST00000357250 NPTX1Q15818 432 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 CHRNA6Q15825 494 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ZBTB46Q86UZ6 589 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 C2orf73Q8N5S3 287 aaPredicted RBP11.45□□□□□ -0.58
COL9A1-202ENST00000357250 OR56A1Q8NGH5 318 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 RHEBL1Q8TAI7 183 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 KCTD7Q96MP8 289 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 GSDMCQ9BYG8 508 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 C11orf16Q9NQ32 467 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ITGB4P16144 1822 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 TEX46H3BTG2 121 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 IL12BP29460 328 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 NCBP2P52298 156 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL9A1-202ENST00000357250 SMSP52788 366 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 PLA2G16P53816 162 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 PITRM1Q5JRX3 1037 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 PLEKHS1Q5SXH7 462 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 C1orf220Q5T0J3 134 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 NEK7Q8TDX7 302 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 TNFAIP8L1Q8WVP5 186 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 STON2Q8WXE9 905 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 TMBIM1Q969X1 311 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 ZSWIM3Q96MP5 696 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 TCF7L1Q9HCS4 588 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 GALPQ9UBC7 116 aa11.45□□□□□ -0.58
COL9A1-202ENST00000357250 PRSS51A0A1B0GVH4 220 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms