RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PRAMEF13Q5VWM6 474 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 LCTLQ6UWM7 567 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 RNF165Q6ZSG1 346 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 SFRP1Q8N474 314 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ZNF548Q8NEK5 533 aaPredicted RBP17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 FAM46DQ8NEK8 389 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 SLC37A2Q8TED4 501 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 MIPEPQ99797 713 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 SLC29A3Q9BZD2 475 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 FARSBQ9NSD9 589 aaKnown RBP17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ZSCAN32Q9NX65 697 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 SNX11Q9Y5W9 270 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 HEATR5BQ9P2D3 2071 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ZNF839A8K0R7 811 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 MANBAO00462 879 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 CLGNO14967 610 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 UGDHO60701 494 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 DNAJC8O75937 253 aaPredicted RBP17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 VARSP26640 1264 aaKnown RBP17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 CASP2P42575 452 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 RASSF2P50749 326 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 HNRNPKP61978 463 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 ABRAXAS2Q15018 415 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 TEAD4Q15561 434 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 CATSPEREQ5SY80 951 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 THEMIS2Q5TEJ8 643 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 LIPJQ5W064 366 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 TMEM198Q66K66 360 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 ASRGL1Q7L266 308 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 ZBTB44Q8NCP5 570 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 OR2T11Q8NH01 316 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 ZDHHC1Q8WTX9 485 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 HBEGFQ99075 208 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 ACAT2Q9BWD1 397 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 RAB11FIP5Q9BXF6 653 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 CPNE7Q9UBL6 633 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 SPASTQ9UBP0 616 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 DYRK1BQ9Y463 629 aa17.52■□□□□ 0.4
SMARCD3-202ENST00000356800 KIR2DS5A0A0G2JLQ3 304 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 A0A0G2JNG1 304 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 OR5K4A6NMS3 321 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 KIR2DS3K7RE56 304 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 YY2O15391 372 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 SDC3O75056 442 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 PIAS2O75928 621 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 JUPP14923 745 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 KIR2DS5Q14953 304 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 ANGPT1Q15389 498 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 ZRSR2Q15696 482 aaKnown RBP17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 IL27RAQ6UWB1 636 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 CEP68Q76N32 757 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 TMPRSS11BQ86T26 416 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 RAB42Q8N4Z0 105 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC5A11Q8WWX8 675 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 LCN9Q8WX39 176 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 WDR34Q96EX3 536 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 MAGEB10Q96LZ2 347 aaPredicted RBP17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 AKTIPQ9H8T0 292 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 ERVMER34-1Q9H9K5 563 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 UCKL1Q9NWZ5 548 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 TAC3Q9UHF0 121 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 TAGLN3Q9UI15 199 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.39
SMARCD3-202ENST00000356800 WDFY4Q6ZS81 3184 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 ADAMTS9Q9P2N4 1935 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 VPS13AQ96RL7 3174 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 B4DGG1 531 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 AQP9O43315 295 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 PRICKLE3O43900 615 aaPredicted RBP17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 GNSP15586 552 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 PRDX6P30041 224 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 PEBP1P30086 187 aaKnown RBP17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 CNR2P34972 360 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 GPR18Q14330 331 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 GRHL2Q6ISB3 625 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 Q6ZSR9 355 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 GKN2Q86XP6 184 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 TRIM48Q8IWZ4 208 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 OR4E2Q8NGC2 313 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 PIGKQ92643 395 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 USP7Q93009 1102 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC7A6OSQ96CW6 309 aaPredicted RBP17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 HAUS8Q9BT25 410 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 POT1Q9NUX5 634 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 SPHK1Q9NYA1 384 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 CCL27Q9Y4X3 112 aa17.51■□□□□ 0.39
SMARCD3-202ENST00000356800 UBDO15205 165 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 VIPP01282 170 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 PRR35P0CG20 571 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 ESRRAP11474 423 aaPredicted RBP17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 CDH1P12830 882 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SHMT2P34897 504 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 KLF10Q13118 480 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SHBQ15464 509 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SGO1Q5FBB7 561 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 ATG9BQ674R7 924 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 NXPE4Q6UWF7 544 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms