RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 RFX4Q33E94 735 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ATAD3CQ5T2N8 411 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 FAM171A1Q5VUB5 890 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 KIAA1614Q5VZ46 1190 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 LSRQ86X29 649 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 LILRB4Q8NHJ6 448 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF675Q8TD23 568 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 LKAAEAR1Q8TD35 194 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 CNDP2Q96KP4 475 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 RLFQ13129 1914 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 SIP14410 1827 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 CLIC1O00299 241 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 MGEA5O60502 916 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 PTHP01270 115 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 TAF12Q16514 161 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 INO80DQ53TQ3 878 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 CYP2U1Q7Z449 544 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ASCC1Q8N9N2 400 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 OR8J3Q8NGG0 315 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 CLIP3Q96DZ5 547 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 FYTTD1Q96QD9 318 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 FEVQ99581 238 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 FAM126AQ9BYI3 521 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 PRKAB1Q9Y478 270 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 RHOCP08134 193 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF792Q3KQV3 632 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 MFSD14CQ5VZR4 134 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 UMODL1-AS1Q8N2C9 162 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 VMP1Q96GC9 406 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 COQ7Q99807 217 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
TRIM4-203ENST00000355947 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
TRIM4-203ENST00000355947 WWP2O00308 870 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 MTX2O75431 263 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 EPN2O95208 641 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PRAMEF1O95521 474 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CA5AP35218 305 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 HNRNPFP52597 415 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ARPC4P59998 168 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 UPP1Q16831 310 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SERPINA9Q86WD7 417 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 DPP10Q8N608 796 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ISG20Q96AZ6 181 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 YIPF6Q96EC8 236 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 COPS8Q99627 209 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PSD2Q9BQI7 771 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 LOC285095A0A1B0GVY8 99 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CXCL11O14625 94 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 STX16O14662 325 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SOX14O95416 240 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ACPPP15309 386 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SLC19A1P41440 591 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 IL10RBQ08334 325 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 MON1AQ86VX9 555 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 GPR65Q8IYL9 337 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CYP4Z2PQ8N1L4 340 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 MINDY2Q8NBR6 621 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PHF10Q8WUB8 498 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 OR5M11Q96RB7 305 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 OLA1Q9NTK5 396 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SAMD4AQ9UPU9 718 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PDYNP01213 254 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 KRT6AP02538 564 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 KRT6BP04259 564 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 DNAJA1P31689 397 aaKnown RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SOAT1P35610 550 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 KIR3DL1P43629 444 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 PPP3CCP48454 512 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 KRT6CP48668 564 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CTXN3Q4LDR2 81 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 LRRC66Q68CR7 880 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ZNF517Q6ZMY9 492 aaPredicted RBP13.23□□□□□ -0.29
TRIM4-203ENST00000355947 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SLC34A3Q8N130 599 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 AADATQ8N5Z0 425 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 OR9Q2Q8NGE9 314 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 SH3KBP1Q96B97 665 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 MMP27Q9H306 513 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 GORASP2Q9H8Y8 452 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 RLIMQ9NVW2 624 aa13.23□□□□□ -0.29
TRIM4-203ENST00000355947 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms