RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 POU2F3Q9UKI9 436 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 PRAMEF11O60813 436 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 STK16O75716 305 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 OPN1SWP03999 348 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 S100A6P06703 90 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 UROSP10746 265 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 MAPKAPK2P49137 400 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 DEFA5Q01523 94 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 CHRNA6Q15825 494 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 KCTD11Q693B1 232 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 POLR2J2Q9GZM3 115 aaKnown RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 RDH8Q9NYR8 311 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 FFAR2O15552 330 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 CD1DP15813 335 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 GNPDA1P46926 289 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 SLC9A3P48764 834 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ACADVLP49748 655 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 UBE2Q1Q7Z7E8 422 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 CYP4Z2PQ8N1L4 340 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 OR4F6Q8NGB9 312 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 OR13J1Q8NGT2 312 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 NT5C3BQ969T7 300 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 DHRS1Q96LJ7 313 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 MYOCQ99972 504 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 DNAJB9Q9UBS3 223 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ARVCFO00192 962 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 FCER2P06734 321 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 HTR6P50406 440 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 APLP1P51693 650 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 RHAGQ02094 409 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 FPGSQ05932 587 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 GPR17Q13304 367 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 CBX2Q14781 532 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 WSCD2Q2TBF2 565 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 CRTC2Q53ET0 693 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 ATL1Q8WXF7 558 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 MTIF3Q9H2K0 278 aaKnown RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 TP63Q9H3D4 680 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-202ENST00000355815 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 PCDHB3Q9Y5E6 796 aa13.72□□□□□ -0.21
SREBF1-202ENST00000355815 FADS2P1A8MWK0 482 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 PGRMC2O15173 223 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 ACOX3O15254 700 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 PPP2R1BP30154 601 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 STK19P49842 368 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 MAZP56270 477 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 KCNJ8Q15842 424 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 PIGGQ5H8A4 983 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 C11orf84Q9BUA3 381 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 BOCQ9BWV1 1114 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 INTS10Q9NVR2 710 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 TMEM9Q9P0T7 183 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 ERVK-11Q9UQG0 969 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 DOCK3Q8IZD9 2030 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 CACNA1CQ13936 2221 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 CYP11A1P05108 521 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 PGRP06401 933 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 GALTP07902 379 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 SNRPD1P62314 119 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 CAMK2GQ13555 558 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 NAE1Q13564 534 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 TAF1AQ15573 450 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 MZT2AQ6P582 158 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 USP30Q70CQ3 517 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 USP45Q70EL2 814 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 LRRC3Q9BY71 257 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
SREBF1-202ENST00000355815 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
SREBF1-202ENST00000355815 SLC35F4A4IF30 521 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 HAS3O00219 553 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 OR5F1O95221 314 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 GLUD1P00367 558 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 CAPN3P20807 821 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.225e-7■■□□□ 13.4
SREBF1-202ENST00000355815 TIE1P35590 1138 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 CYP20A1Q6UW02 462 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 SYVN1Q86TM6 617 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 STARD8Q92502 1023 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.22
SREBF1-202ENST00000355815 C8orf48Q96LL4 319 aa13.71□□□□□ -0.22
SREBF1-202ENST00000355815 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms