RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 C1orf61Q13536 156 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 PLK5Q496M5 336 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 FRG2Q64ET8 278 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 GRHL2Q6ISB3 625 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SCIMPQ6UWF3 145 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 TMPRSS11BQ86T26 416 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 NAGSQ8N159 534 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SDR16C5Q8N3Y7 309 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 FBXL6Q8N531 539 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 C2orf73Q8N5S3 287 aaPredicted RBP9.28□□□□□ -0.92
NPHP1-202ENST00000355301 OR2T11Q8NH01 316 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SH3KBP1Q96B97 665 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 FRG2BQ96QU4 278 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 EFCAB11Q9BUY7 163 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 ELOVL6Q9H5J4 265 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 XKR8Q9H6D3 395 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 ERVMER34-1Q9H9K5 563 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 FARSBQ9NSD9 589 aaKnown RBP9.28□□□□□ -0.92
NPHP1-202ENST00000355301 CPNE7Q9UBL6 633 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 ZNF490Q9ULM2 529 aaPredicted RBP9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SLC12A4Q9UP95 1085 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 SH2B3Q9UQQ2 575 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 PCDHGA11Q9Y5H2 935 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 PCM1Q15154 2024 aa9.28□□□□□ -0.92
NPHP1-202ENST00000355301 TP53BP1Q12888 1972 aaPredicted RBP9.27□□□□□ -0.92
NPHP1-202ENST00000355301 A0A1B0GTW7 788 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SLC28A1O00337 649 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LSM1O15116 133 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 UBDO15205 165 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 HRO43593 1189 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PRICKLE3O43900 615 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GPR37L1O60883 481 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PDYNP01213 254 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 VIPP01282 170 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ALDOCP09972 364 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 C1GALT1C1LP0DN25 315 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 T-ENOLP0DO92 83 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GNSP15586 552 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LBPP18428 481 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SHMT2P34897 504 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CNR2P34972 360 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 DHPSP49366 369 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 IRX1P78414 480 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 DMTNQ08495 405 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TEAD4Q15561 434 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ZNF528Q3MIS6 628 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CATSPEREQ5SY80 951 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 C10orf62Q5T681 223 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 NXPE4Q6UWF7 544 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 AMIGO1Q86WK6 493 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 C17orf64Q86WR6 236 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GKN2Q86XP6 184 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 FAM46DQ8NEK8 389 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ABHD11Q8NFV4 315 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 OR2A1Q8NGT9 310 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 WDR20Q8TBZ3 569 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SLC37A2Q8TED4 501 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SELENOMQ8WWX9 145 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LCN9Q8WX39 176 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PATE1Q8WXA2 126 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ZC3H10Q96K80 434 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CATSPER2Q96P56 530 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 HBEGFQ99075 208 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TUBB6Q9BUF5 446 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ACAT2Q9BWD1 397 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TWSG1Q9GZX9 223 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TMEM74BQ9NUR3 256 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GEMIN8Q9NWZ8 242 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SPASTQ9UBP0 616 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TAC3Q9UHF0 121 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PILRBQ9UKJ0 227 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 COPG1Q9Y678 874 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TDRD6O60522 2096 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 NPIPB8E9PQR5 432 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LMO7DNF2Z398 122 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 RGS14O43566 566 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PEX11AO75192 247 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ATP5HO75947 161 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 UNC5CO95185 931 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CBX6O95503 412 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 CTSKP43235 329 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PRDX1Q06830 199 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LAPTM5Q13571 262 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 GPR18Q14330 331 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 SMU1Q2TAY7 513 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ATP6AP1LQ52LC2 224 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 PAGE2BQ5JRK9 111 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 C6orf136Q5SQH8 315 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ICE2Q659A1 982 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 FAM129CQ86XR2 697 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 TRIM48Q8IWZ4 208 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 RBM12BQ8IXT5 1001 aaKnown RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 LAS2Q8IYD9 372 aa9.27□□□□□ -0.93
NPHP1-202ENST00000355301 ZNF548Q8NEK5 533 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-202ENST00000355301 OR7G3Q8NG95 312 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms