RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 FGF3P11487 239 aaPredicted RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 AKR1A1P14550 325 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 PGAM2P15259 253 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF14P17017 642 aaPredicted RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF3P17036 446 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRKACBP22694 351 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 DPY19L3Q6ZPD9 716 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 SAMD14Q8IZD0 417 aaPredicted RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF471Q9BX82 626 aaPredicted RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 HCN3Q9P1Z3 774 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A1W2PRB8 838 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR6C75A6NL08 312 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 DSTNP60981 165 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 KCNAB2Q13303 367 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR2L2Q8NH16 312 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 CRYBB1P53674 252 aaPredicted RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 MRPS6P82932 125 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ESAMQ96AP7 390 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 HSPA12BQ96MM6 686 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 HEPHQ9BQS7 1158 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 METTL8Q9H825 291 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 STARD7Q9NQZ5 370 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 NOP16Q9Y3C1 178 aaKnown RBP12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF451Q9Y4E5 1061 aa12.42□□□□□ -0.42
SYNCRIP-201ENST00000355238 TRAV6A0A075B6T7 132 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 DFNA5O60443 496 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PPP1R11O60927 126 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ECI2O75521 394 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 OXSR1O95747 527 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ASGR1P07306 291 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ARL2P36404 184 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 UFM1P61960 85 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 DSG2Q14126 1118 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SEC23BQ15437 767 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 XKR4Q5GH76 650 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PNCKQ6P2M8 343 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 METTL25Q8N6Q8 603 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF366Q8N895 744 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 HSH2DQ96JZ2 352 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRICKLE1Q96MT3 831 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 TBX5Q99593 518 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 TSPOAP1O95153 1857 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CLCA1A8K7I4 914 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 KRT33AO76009 404 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MYF6P23409 242 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 RORAP35398 523 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 GRK6P43250 576 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 HNRNPFP52597 415 aaKnown RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CTBP2P56545 445 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF155Q12901 538 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 RABL3Q5HYI8 236 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MEDAGQ5VYS4 303 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SNX29P2Q8IUI4 249 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC15A4Q8N697 577 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 AQP11Q8NBQ7 271 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR9I1Q8NGQ6 314 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 S100A16Q96FQ6 103 aaKnown RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 DPEP1P16444 411 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 AMD1P17707 334 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CD40LGP29965 261 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 DGKQP52824 942 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 UGT8Q16880 541 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 LHFPL3Q86UP9 236 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 NKD1Q969G9 470 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 GAL3ST3Q96A11 431 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 NXPE2Q96DL1 559 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 HMCESQ96FZ2 354 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC35A5Q9BS91 424 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PCDH10Q9P2E7 1040 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 FKBPLQ9UIM3 349 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 IQCF5A8MTL0 148 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 NSG1P42857 185 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 GHDCQ8N2G8 530 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZMIZ2Q8NF64 920 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF486Q96H40 463 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 C5orf34Q96MH7 638 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SRRDQ9UH36 339 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 TRBC2A0A5B9 178 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PCDH7O60245 1069 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRKACGP22612 351 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SCNN1AP37088 669 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAP3K8P41279 467 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms