RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MDC1Q14676 2089 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 MED13LQ71F56 2210 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 A0A0A6YYK5 440 aaPredicted RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 TRAV17A0A0B4J275 112 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 CLDN14O95500 239 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 PRAMEF1O95521 474 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 PYGMP11217 842 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 PIM1P11309 404 aaPredicted RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 HOXB4P17483 251 aaPredicted RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 MDH1P40925 334 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 KIR3DL1P43629 444 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 CHRNA4P43681 627 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 MXRA7P84157 204 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 INAQ16352 499 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 BCL7AQ4VC05 210 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 SIRPB2Q5JXA9 342 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 FAM20CQ8IXL6 584 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 ADGRF3Q8IZF5 1079 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 EIF1ADQ8N9N8 165 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 DLG3Q92796 817 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 GFM2Q969S9 779 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 LMF1Q96S06 567 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 TRIM56Q9BRZ2 755 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 TRABDQ9H4I3 376 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 TFB2MQ9H5Q4 396 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 ASB8Q9H765 288 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 MRM3Q9HC36 420 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 ZNHIT6Q9NWK9 470 aaKnown RBP10.74□□□□□ -0.69
RTN3-204ENST00000354497 IL17CQ9P0M4 197 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 CRLS1Q9UJA2 301 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
RTN3-204ENST00000354497 A0A0J9YY10 115 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 H3BMH7 237 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 GAPDHSO14556 408 aaPredicted RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 STX7O15400 261 aaKnown RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 RASAL1O95294 804 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 CRYABP02511 175 aaKnown RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 RALBP11234 206 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 CD99P14209 185 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 MST1P26927 711 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 GABRA4P48169 554 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SERPINB8P50452 374 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 CDSNQ15517 529 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 C3AR1Q16581 482 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 NKG7Q16617 165 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 ZNF449Q6P9G9 518 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 NPNTQ6UXI9 565 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 MEX3BQ6ZN04 569 aaKnown RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 NCCRP1Q6ZVX7 275 aaPredicted RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 OVCH1Q7RTY7 1134 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 KBTBD2Q8IY47 623 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 PRSS58Q8IYP2 241 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SIRT6Q8N6T7 355 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 OR11G2Q8NGC1 345 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SUN3Q8TAQ9 357 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 FKBP10Q96AY3 582 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 TADA1Q96BN2 335 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 C14orf79Q96F83 325 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 CRB3Q9BUF7 120 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 MVB12BQ9H7P6 319 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 COG4Q9H9E3 785 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 MCCC2Q9HCC0 563 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SMOXQ9NWM0 555 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 HACD3Q9P035 362 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SLC12A4Q9UP95 1085 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 PLCL2Q9UPR0 1127 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 ICKQ9UPZ9 632 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 TDRKHQ9Y2W6 561 aaKnown RBP10.73□□□□□ -0.69
RTN3-204ENST00000354497 PCDHGB6Q9Y5F9 930 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 SPTBP11277 2137 aa10.73□□□□□ -0.69
RTN3-204ENST00000354497 FER1L5A0AVI2 2057 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 NUP210LQ5VU65 1888 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 A0A1B0GX78 115 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 DPPA5A6NC42 116 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ISM1B1AKI9 464 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 SLC19A2O60779 497 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 DRD2P14416 443 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ITGAXP20702 1163 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 TNFSF10P50591 281 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 WNT3AP56704 352 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 TAS2R40P59535 323 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 DYNLT1P63172 113 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 PMP22Q01453 160 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 CBX3Q13185 183 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ITIH4Q14624 930 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 PDK1Q15118 436 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 SLC14A2Q15849 920 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ADRM1Q16186 407 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 BCL2A1Q16548 175 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.72□□□□□ -0.69
RTN3-204ENST00000354497 C3orf62Q6ZUJ4 267 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 ALDH16A1Q8IZ83 802 aa10.72□□□□□ -0.69
RTN3-204ENST00000354497 IPMKQ8NFU5 416 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms