RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TPBGLP0DKB5 382 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 ITGAMP11215 1152 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 PEBP1P30086 187 aaKnown RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 ADRA1AP35348 466 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 EMP2P54851 167 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 LTBQ06643 244 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 ZNF33BQ06732 778 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 RPA4Q13156 261 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 KIR2DS3Q14952 304 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 BRD3Q15059 726 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 FAM214AQ32MH5 1076 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 YOD1Q5VVQ6 348 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 RAD9BQ6WBX8 426 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 Q71RC1 249 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 C2orf73Q8N5S3 287 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 C19orf43Q9BQ61 176 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 GORASP1Q9BQQ3 440 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 YIPF2Q9BWQ6 316 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 LACRTQ9GZZ8 138 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 RNF32Q9H0A6 362 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 CXXC4Q9H2H0 198 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 VPS37BQ9H9H4 285 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 ZNF282Q9UDV7 671 aaPredicted RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 POLG2Q9UHN1 485 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 REXO2Q9Y3B8 237 aaKnown RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 GTF3C1Q12789 2109 aa15.1■□□□□ 0.01
DDX55-202ENST00000354291 GOLGA6L9A6NEM1 432 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 A8MUI8 341 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 TTI1O43156 1089 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 SLCO2B1O94956 709 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 CRTAMO95727 393 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 PTMAP06454 111 aaKnown RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 PSMB4P28070 264 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 ZNF658BQ4V348 819 aaPredicted RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 ZC3H12BQ5HYM0 836 aaKnown RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 CES4AQ5XG92 561 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 RIPOR1Q6ZS17 1223 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 NEK10Q6ZWH5 1172 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 KIAA1328Q86T90 577 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 DOLPP1Q86YN1 238 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 TBC1D21Q8IYX1 336 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 TAB3Q8N5C8 712 aaPredicted RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 UBL4BQ8N7F7 174 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 LRRC57Q8N9N7 239 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 HEXDCQ8WVB3 486 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 ALG3Q92685 438 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 ULK4Q96C45 1275 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 SPATA13Q96N96 652 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 BAG1Q99933 345 aaPredicted RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 SELENOSQ9BQE4 189 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 KLHL1Q9NR64 748 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 STOX2Q9P2F5 926 aaPredicted RBP15.09■□□□□ 0.01
DDX55-202ENST00000354291 AMFRQ9UKV5 643 aa15.09■□□□□ 0.01
DDX55-202ENST00000354291 VPS13CQ709C8 3753 aa15.08■□□□□ 0
DDX55-202ENST00000354291 IGHV1-45A0A0A0MS14 117 aa15.08■□□□□ 0
DDX55-202ENST00000354291 GRID2IPA4D2P6 1211 aa15.08■□□□□ 0
DDX55-202ENST00000354291 FOXO6A8MYZ6 492 aa15.08■□□□□ 0
DDX55-202ENST00000354291 MIF4GDA9UHW6 222 aaKnown RBP15.08■□□□□ 0
DDX55-202ENST00000354291 E9PLN8 166 aa15.08■□□□□ 0
DDX55-202ENST00000354291 VSX2P58304 361 aaPredicted RBP15.08■□□□□ 0
DDX55-202ENST00000354291 XIAPP98170 497 aa15.08■□□□□ 0
DDX55-202ENST00000354291 CEBPEQ15744 281 aa15.08■□□□□ 0
DDX55-202ENST00000354291 WASHC2DQ5SRD0 308 aa15.08■□□□□ 0
DDX55-202ENST00000354291 FIGLAQ6QHK4 219 aa15.08■□□□□ 0
DDX55-202ENST00000354291 PEX26Q7Z412 305 aa15.08■□□□□ 0
DDX55-202ENST00000354291 CLDN19Q8N6F1 224 aa15.08■□□□□ 0
DDX55-202ENST00000354291 LMNTD1Q8N9Z9 388 aa15.08■□□□□ 0
DDX55-202ENST00000354291 ACRBPQ8NEB7 543 aa15.08■□□□□ 0
DDX55-202ENST00000354291 PHF10Q8WUB8 498 aaKnown RBP15.08■□□□□ 0
DDX55-202ENST00000354291 NANOS1Q8WY41 292 aaKnown RBP15.08■□□□□ 0
DDX55-202ENST00000354291 VKORC1Q9BQB6 163 aa15.08■□□□□ 0
DDX55-202ENST00000354291 APOL2Q9BQE5 337 aa15.08■□□□□ 0
DDX55-202ENST00000354291 REPIN1Q9BWE0 567 aaKnown RBP15.08■□□□□ 0
DDX55-202ENST00000354291 ARNT2Q9HBZ2 717 aa15.08■□□□□ 0
DDX55-202ENST00000354291 RIC8BQ9NVN3 520 aa15.08■□□□□ 0
DDX55-202ENST00000354291 FEZ2Q9UHY8 353 aaPredicted RBP15.08■□□□□ 0
DDX55-202ENST00000354291 TEKT2Q9UIF3 430 aa15.08■□□□□ 0
DDX55-202ENST00000354291 SNRNP200O75643 2136 aaKnown RBP15.08■□□□□ 0
DDX55-202ENST00000354291 HYKKA2RU49 373 aa15.07■□□□□ 0
DDX55-202ENST00000354291 IDSB3KWA1 339 aa15.07■□□□□ 0
DDX55-202ENST00000354291 PRRG2O14669 202 aa15.07■□□□□ 0
DDX55-202ENST00000354291 ADAM10O14672 748 aa15.07■□□□□ 0
DDX55-202ENST00000354291 ASNA1O43681 348 aa15.07■□□□□ 0
DDX55-202ENST00000354291 ZWINTO95229 277 aa15.07■□□□□ 0
DDX55-202ENST00000354291 MED26O95402 600 aa15.07■□□□□ 0
DDX55-202ENST00000354291 TSPAN12O95859 305 aa15.07■□□□□ 0
DDX55-202ENST00000354291 ITGALP20701 1170 aa15.07■□□□□ 0
DDX55-202ENST00000354291 CDKN1CP49918 316 aaPredicted RBP15.07■□□□□ 0
DDX55-202ENST00000354291 ST13P50502 369 aaKnown RBP15.07■□□□□ 0
DDX55-202ENST00000354291 HSF1Q00613 529 aa15.07■□□□□ 0
DDX55-202ENST00000354291 FOLH1Q04609 750 aa15.07■□□□□ 0
DDX55-202ENST00000354291 KIF5AQ12840 1032 aa15.07■□□□□ 0
DDX55-202ENST00000354291 MYBPHQ13203 477 aa15.07■□□□□ 0
DDX55-202ENST00000354291 AADACL2Q6P093 401 aa15.07■□□□□ 0
DDX55-202ENST00000354291 CEP128Q6ZU80 1094 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms