RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NDUFB8O95169 186 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 VNN2O95498 520 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 WDPCPO95876 746 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 IGHV2-70P01814 119 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPP1P10451 314 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HSPA5P11021 654 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SSTR1P30872 391 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARRB2P32121 409 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ACAA2P42765 397 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FOXM1Q08050 763 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GRIK2Q13002 908 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPP2Q13103 211 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GK2Q14410 553 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MAPK11Q15759 364 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CTF1Q16619 201 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CA9Q16790 459 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TTC31Q49AM3 519 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM31Q5JXX7 168 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZDHHC20Q5W0Z9 365 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PM20D1Q6GTS8 502 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARHGAP11AQ6P4F7 1023 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ENPP7Q6UWV6 458 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 Q75L30 129 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TIGD4Q8IY51 512 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PM20D2Q8IYS1 436 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 C1orf87Q8N0U7 546 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 EXD1Q8NHP7 514 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ADAMTS14Q8WXS8 1223 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SHC3Q92529 594 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PYCR2Q96C36 320 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PKP2Q99959 881 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DDX50Q9BQ39 737 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TRAF4Q9BUZ4 470 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NAPBQ9H115 298 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ACTR8Q9H981 624 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 AKIRIN1Q9H9L7 192 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HHATLQ9HCP6 504 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MRPL17Q9NRX2 175 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PIGVQ9NUD9 493 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MIOSQ9NXC5 875 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF624Q9P2J8 865 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NOCTQ9UK39 431 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PLA2G4CQ9UP65 541 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 OR2W1Q9Y3N9 320 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ASB3Q9Y575 518 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF541Q9H0D2 1346 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CACNA1GO43497 2377 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CFAP73A6NFT4 308 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 KCNN4O15554 427 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ITM2AO43736 263 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 HMMRO75330 724 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PRKRAO75569 313 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CRCPO75575 148 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 RNF8O76064 485 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 BMP10O95393 424 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 APBB3O95704 486 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PTMAP06454 111 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SP9P0CG40 484 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MXI1P50539 228 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MAT1AQ00266 395 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TEFQ10587 303 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 FUT7Q11130 342 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MSLNQ13421 630 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 OR4C11Q6IEV9 310 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NPEPL1Q8NDH3 523 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ANKRD20A12PQ8NF67 263 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SLC35F5Q8WV83 523 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SLAMF9Q96A28 289 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SARAFQ96BY9 339 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 THOC1Q96FV9 657 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 QRFPRQ96P65 431 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MTERF1Q99551 399 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 WNT5BQ9H1J7 359 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 YAE1D1Q9NRH1 226 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 DPP3Q9NY33 737 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 DONSONQ9NYP3 566 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TMOD2Q9NZR1 351 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF644Q9H582 1327 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 KCPQ6ZWJ8 1503 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NEMP2A6NFY4 417 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PPEF2O14830 753 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SPINT2O43291 252 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NDUFB4O95168 129 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PGLSO95336 258 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 FGF2P09038 288 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 HSPA8P11142 646 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 KRT13P13646 458 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ENO3P13929 434 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TCEA1P23193 301 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PTPN4P29074 926 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MAGEA4P43358 317 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CNN1P51911 297 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SOX10P56693 466 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NLRP11P59045 1033 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 BTG1P62324 171 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ABCC8Q09428 1581 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms