RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 TSTQ16762 297 aaKnown RBP17.56■□□□□ 0.4
CTSB-202ENST00000353047 RNASE12Q5GAN4 147 aaKnown RBP17.56■□□□□ 0.4
CTSB-202ENST00000353047 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
CTSB-202ENST00000353047 DESI1Q6ICB0 168 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 DEF8Q6ZN54 512 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 C10orf111Q8N326 155 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 PDPRQ8NCN5 879 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 VNN3Q9NY84 501 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 RNF6Q9Y252 685 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 PCDHGA4Q9Y5G9 962 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 LOC285095A0A1B0GVY8 99 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 IQCA1LA6NCM1 817 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 TMCC2O75069 709 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 ZNF33AQ06730 810 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 ATAD3BQ5T9A4 648 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 XAF1Q6GPH4 301 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 NADSYN1Q6IA69 706 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 PLEKHG7Q6ZR37 379 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 TMPRSS11BQ86T26 416 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 MEX3DQ86XN8 651 aaKnown RBP17.56■□□□□ 0.4
CTSB-202ENST00000353047 OR4A15Q8NGL6 344 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 SCAMP4Q969E2 229 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 NECTIN4Q96NY8 510 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 ARNT2Q9HBZ2 717 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 CSNK1G1Q9HCP0 422 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 FZD4Q9ULV1 537 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 WDR37Q9Y2I8 494 aa17.56■□□□□ 0.4
CTSB-202ENST00000353047 TPD52L2O43399 206 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 ANXA4P09525 319 aaPredicted RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 SLC16A1P53985 500 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 VLDLRP98155 873 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 CD83Q01151 205 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 FEVQ99581 238 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 PTPN18Q99952 460 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 RNF38Q9H0F5 515 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SMG9Q9H0W8 520 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 SLCO3A1Q9UIG8 710 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 CLEC4AQ9UMR7 237 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SCML2Q9UQR0 700 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 ANKDD1BA6NHY2 528 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SEC14L2O76054 403 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SLC10A3P09131 477 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 FLT3LGP49771 235 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 STK19P49842 368 aaPredicted RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 GSTM4Q03013 218 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 TXNDC8Q6A555 127 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 OR9Q1Q8NGQ5 310 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 TMEM121BQ9BXQ6 578 aaPredicted RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 TRPV5Q9NQA5 729 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SLC25A37Q9NYZ2 338 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 DYTNA2CJ06 578 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 H3BM21 787 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 OR7A17O14581 309 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 STX16O14662 325 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 SMAD6O43541 496 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 OR10H3O60404 316 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 TNFRSF21O75509 655 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 FHP07954 510 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 CAMK2GQ13555 558 aaPredicted RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 EIF3MQ7L2H7 374 aaKnown RBP17.55■□□□□ 0.4
CTSB-202ENST00000353047 MAGEH1Q9H213 219 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 CRISPLD1Q9H336 500 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 CAPN10Q9HC96 672 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 RPS6KA6Q9UK32 745 aa17.55■□□□□ 0.4
CTSB-202ENST00000353047 C2orf78A6NCI8 922 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 FAM155AB1AL88 458 aaPredicted RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 SCAMP1O15126 338 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 AP2A2O94973 939 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 DNAJB1P25685 340 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 PTGER1P34995 402 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 KRT20P35900 424 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 TNFAIP8L2Q6P589 184 aaPredicted RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 SCAIQ8N9R8 606 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 KCNJ9Q92806 393 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 PPP1R14BQ96C90 147 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 PSKH2Q96QS6 385 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 YTHDF1Q9BYJ9 559 aaKnown RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 MIEF1Q9NQG6 463 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 M0QX08 132 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 CTDSP2O14595 271 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 TLL1O43897 1013 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 RPS26P62854 115 aaKnown RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 CPTPQ5TA50 214 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 AADATQ8N5Z0 425 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 CELF2-AS1Q8N7Q2 184 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 ZNF548Q8NEK5 533 aaPredicted RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 OR9Q2Q8NGE9 314 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 BPIFB1Q8TDL5 484 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 MBOAT4Q96T53 435 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 SGK2Q9HBY8 427 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 FAM92AA1XBS5 289 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 CLDN11O75508 207 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 TGFB1P01137 390 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 SSTR4P31391 388 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 ST3GAL4Q11206 333 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 USP41Q3LFD5 358 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms