RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IGSF5Q9NSI5 407 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 A0A1W2PP18 115 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 TSPAN4O14817 238 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 JAK1P23458 1154 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 GALK1P51570 392 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ABATP80404 500 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ARF5P84085 180 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 IL5RAQ01344 420 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ACSBG2Q5FVE4 666 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 ENPP7Q6UWV6 458 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 KRT84Q9NSB2 600 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 USE1Q9NZ43 259 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 DNMT3BQ9UBC3 853 aaKnown RBP11.85□□□□□ -0.51
SMAD9-201ENST00000350148 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 POMPQ9Y244 141 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 SPO11Q9Y5K1 396 aa11.85□□□□□ -0.51
SMAD9-201ENST00000350148 K7ERQ8 282 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PCDH7O60245 1069 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CYP4F3Q08477 520 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CNPY1Q3B7I2 92 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 NME7Q9Y5B8 376 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 LINC01553A4QN01 128 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ACP5P13686 325 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 HLA-EP13747 358 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 GNSP15586 552 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ETV3P41162 512 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CST6Q15828 149 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ARMC4Q5T2S8 1044 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 UTS2BQ765I0 119 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 SATL1Q86VE3 508 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PIK3C3Q8NEB9 887 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ZNF778Q96MU6 729 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PNPLA3Q9NST1 481 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CCDC59Q9P031 241 aaKnown RBP11.84□□□□□ -0.51
SMAD9-201ENST00000350148 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PEX1O43933 1283 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 FGF4P08620 206 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 GKP32189 559 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 SHMT2P34897 504 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 IST1P53990 364 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 PRR5P85299 388 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ABRAXAS1Q6UWZ7 409 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 TRPV3Q8NET8 790 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 CENPNQ96H22 339 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-201ENST00000350148 Q96MT0 163 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ADRB3P13945 408 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ITGAXP20702 1163 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ACTR1BP42025 376 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ACTR1AP61163 376 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 C1DQ13901 141 aaKnown RBP11.84□□□□□ -0.51
SMAD9-201ENST00000350148 RBM44Q6ZP01 1051 aaKnown RBP11.84□□□□□ -0.51
SMAD9-201ENST00000350148 OR8H2Q8N162 312 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 GALNT15Q8N3T1 639 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 ISL2Q96A47 359 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-201ENST00000350148 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 SLC22A14Q9Y267 594 aa11.84□□□□□ -0.51
SMAD9-201ENST00000350148 KLF8O95600 359 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CD9P21926 228 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CLK3P49761 638 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 C1QTNF8P60827 252 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CDC42P60953 191 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM126BQ8IUX1 230 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 GPR135Q8IZ08 494 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CCDC106Q9BWC9 280 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 HCFC2Q9Y5Z7 792 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 G3V2L1 256 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SDHDO14521 159 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 PDPK1O15530 556 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 OR1I1O60431 355 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 UGDHO60701 494 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 ERAL1O75616 437 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 NELFEP18615 380 aaKnown RBP11.83□□□□□ -0.52
SMAD9-201ENST00000350148 GCAP28676 217 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CLCNKAP51800 687 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 MAPK10P53779 464 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SEMG2Q02383 582 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 UBXN2BQ14CS0 331 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 MSANTD1Q6ZTZ1 278 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CEP68Q76N32 757 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 ISCA2Q86U28 154 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CAMKVQ8NCB2 501 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 OLIG1Q8TAK6 271 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 STON2Q8WXE9 905 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SLC12A9Q9BXP2 914 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 H7C0S8 307 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 CLDN4O14493 209 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 SLC7A1P30825 629 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 GSTM5P46439 218 aa11.83□□□□□ -0.52
SMAD9-201ENST00000350148 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms