RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PLA2G15Q8NCC3 412 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 BTN2A2Q8WVV5 523 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ARRDC3Q96B67 414 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 LMLNQ96KR4 655 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PANX1Q96RD7 426 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 MCCC1Q96RQ3 725 aaPredicted RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 CPEB1Q9BZB8 566 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 POLR1BQ9H9Y6 1135 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TRBV23OR9-2A0A075B6M9 112 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TCRBV3S1A0A5B6 114 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SLC28A1O00337 649 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF197O14709 1029 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZBTB11O95625 1053 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FTH1P02794 183 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 EBLN1P0CF75 366 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 C6P13671 934 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 C21orf59P57076 290 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ITGADQ13349 1161 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PDCD4Q53EL6 469 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FRG2Q64ET8 278 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 RD3Q7Z3Z2 195 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SLC44A2Q8IWA5 706 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ADGRG5Q8IZF4 528 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CBARPQ8N350 705 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF740Q8NDX6 193 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FRG2BQ96QU4 278 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 RPP25Q9BUL9 199 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CLK4Q9HAZ1 481 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 MRGBPQ9NV56 204 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ACTR3BQ9P1U1 418 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 GMEB1Q9Y692 573 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 RFXANKO14593 260 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SNAP29O95721 258 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 LDLRP01130 860 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CATP04040 527 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 NUP107P57740 925 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CYP4F3Q08477 520 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZCCHC8Q6NZY4 707 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TMEM26Q6ZUK4 368 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 C1orf52Q8N6N3 182 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SORBS1Q9BX66 1292 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 NAA50Q9GZZ1 169 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SPASTQ9UBP0 616 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PCDHB14Q9Y5E9 798 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SLC9A3R1O14745 358 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PRKD3O94806 890 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FKBP9O95302 570 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PAK4O96013 591 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 C8BP07358 591 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 HRH2P25021 359 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TIE1P35590 1138 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CSNK1DP48730 415 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PHC1P78364 1004 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 CHRNB3Q05901 458 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TRAP1Q12931 704 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 DLEU7Q6UYE1 221 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FKBP9P1Q75LS8 142 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 JPH3Q8WXH2 748 aaPredicted RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 ISG20Q96AZ6 181 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SAMD11Q96NU1 681 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 PKP4Q99569 1192 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SLC12A9Q9BXP2 914 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 SMURF2Q9HAU4 748 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 FZD3Q9NPG1 666 aa13.48□□□□□ -0.25
TRIM4-201ENST00000349062 TRNAU1APQ9NX07 287 aaKnown RBP13.48□□□□□ -0.25
TRIM4-201ENST00000349062 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
TRIM4-201ENST00000349062 POP7O75817 140 aaKnown RBP13.47□□□□□ -0.25
TRIM4-201ENST00000349062 PRR35P0CG20 571 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 FGD3Q5JSP0 725 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 TBPL2Q6SJ96 375 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 ERMP1Q7Z2K6 904 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 OR4K1Q8NGD4 311 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 ITCHQ96J02 903 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 TPD52L3Q96J77 140 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 OSBPL11Q9BXB4 747 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 BRINP2Q9C0B6 783 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 CXorf21Q9HAI6 301 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 PNPLA3Q9NST1 481 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms