RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 AQP1P29972 269 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 PPP5CP53041 499 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 CEBPGP53567 150 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RNASEH2BQ5TBB1 312 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 TAPT1Q6NXT6 567 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 CUZD1Q86UP6 607 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF527Q8NB42 609 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 PPCDCQ96CD2 204 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 TSSK3Q96PN8 268 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC39A8Q9C0K1 460 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 USP29Q9HBJ7 922 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 HMX3A6NHT5 357 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ALOX15BO15296 676 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 HDAC3O15379 428 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 HOXB6P17509 224 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 CHMP24386 653 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 SSR2P43308 183 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ALDH3A2P51648 485 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 AIF1P55008 147 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 MANFP55145 182 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 MC2RQ01718 297 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 POU4F2Q12837 409 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 SELPLGQ14242 412 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FAM182AQ5T1J6 154 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 GK5Q6ZS86 529 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 AUTS2Q8WXX7 1259 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 BCL2L14Q9BZR8 327 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 TIMM22Q9Y584 194 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 OR10H3O60404 316 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 MT-CYBP00156 380 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RLN1P04808 185 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 SNTA1Q13424 505 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FASTKD3Q14CZ7 662 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RNASE12Q5GAN4 147 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ATAT1Q5SQI0 421 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 PIWIL4Q7Z3Z4 852 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ESX1Q8N693 406 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 OR4Q3Q8NH05 313 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 GPR21Q99679 349 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF223Q9UK11 482 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 MGAT4BQ9UQ53 548 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FXYD6-FXYD2A0A087WZ82 144 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 A6NL46 340 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RFPL1O75677 317 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FABP1P07148 127 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 CSTF2P33240 577 aaKnown RBP eCLIP10.85□□□□□ -0.674e-9■■■■■ 27
SMARCE1-202ENST00000348513 NFATC3Q12968 1075 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ATXN7L2Q5T6C5 722 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ANKRD54Q6NXT1 300 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 RAB11FIP2Q7L804 512 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 SYVN1Q86TM6 617 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 ZBTB2Q8N680 514 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FEM1CQ96JP0 617 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 IER2Q9BTL4 223 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 CCDC106Q9BWC9 280 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 QRSL1Q9H0R6 528 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 APOBEC3GQ9HC16 384 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 FAM86C1Q9NVL1 165 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 BCL9LQ86UU0 1499 aa10.85□□□□□ -0.67
SMARCE1-202ENST00000348513 A0A075B6Q4 140 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 FPGTO14772 594 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 AOC2O75106 756 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 FGF19O95750 216 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 FBXO22Q8NEZ5 403 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 SCAMP5Q8TAC9 235 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 RELTQ969Z4 430 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 CYP2S1Q96SQ9 504 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 HRH3Q9Y5N1 445 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 KRBOX1C9JBD0 128 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 ATG13O75143 517 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 LRIG2O94898 1065 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 SYN1P17600 705 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 PSMA1P25786 263 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 CDH11P55287 796 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 PITPNAQ00169 270 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 DUSP6Q16828 381 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 CXXC5Q7LFL8 322 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 SPPL2CQ8IUH8 684 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 TMEM192Q8IY95 271 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 UBQLNLQ8IYU4 475 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 LMLNQ96KR4 655 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 FNDC11Q9BVV2 318 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 OR51B5Q9H339 312 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 BCAS3Q9H6U6 928 aa10.84□□□□□ -0.67
SMARCE1-202ENST00000348513 TMEM45AQ9NWC5 275 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms