RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TOR2AQ5JU69 321 aa14.94□□□□□ -0.02
LMNA-201ENST00000347559 ESX1Q8N693 406 aa14.94□□□□□ -0.02
LMNA-201ENST00000347559 OR4M1Q8NGD0 313 aa14.94□□□□□ -0.02
LMNA-201ENST00000347559 PMEPA1Q969W9 287 aa14.94□□□□□ -0.02
LMNA-201ENST00000347559 PGAP3Q96FM1 320 aaPredicted RBP14.94□□□□□ -0.02
LMNA-201ENST00000347559 IL1RAPQ9NPH3 570 aa14.94□□□□□ -0.02
LMNA-201ENST00000347559 ZNF646O15015 1829 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 A0A0B4J293 547 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 GFRA2O00451 464 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 IFRD1O00458 451 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 STX16O14662 325 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 COL6A1P12109 1028 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 CDKN1CP49918 316 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 STC1P52823 247 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 MAPK12P53778 367 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 INO80DQ53TQ3 878 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 ESCO2Q56NI9 601 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 DOK6Q6PKX4 331 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ZNF605Q86T29 641 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ASB15Q8WXK1 588 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 RNF31Q96EP0 1072 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ZSCAN5AQ9BUG6 496 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 C11orf54Q9H0W9 315 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 SAMD4AQ9UPU9 718 aaKnown RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 NEU3Q9UQ49 428 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 POLHQ9Y253 713 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 GUCA1CO95843 209 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ATF4P18848 351 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 SSTR4P31391 388 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ETV6P41212 452 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 TARDBPQ13148 414 aaKnown RBP eCLIP14.93□□□□□ -0.02
LMNA-201ENST00000347559 ZNF79Q15937 498 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 C10orf62Q5T681 223 aaPredicted RBP14.93□□□□□ -0.02
LMNA-201ENST00000347559 GALNT7Q86SF2 657 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 GLCCI1Q86VQ1 547 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 COL21A1Q96P44 957 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ZNF382Q96SR6 550 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 ASPNQ9BXN1 380 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 SP110Q9HB58 689 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 LCTP09848 1927 aa14.93□□□□□ -0.02
LMNA-201ENST00000347559 TLR5O60602 858 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 RPS19P39019 145 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 RPS5P46782 204 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 RENBPP51606 427 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SUOXP51687 545 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 NKX3-2P78367 333 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SAMD7Q7Z3H4 446 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SLC44A2Q8IWA5 706 aaPredicted RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 ENKURQ8TC29 256 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 MGLLQ99685 303 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 GABARAPL1Q9H0R8 117 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 FKBP14Q9NWM8 211 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 MED16Q9Y2X0 877 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 LEUTXA8MZ59 168 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 FAM220BPB1ANY3 271 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 B4DXG7 233 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 OR1I1O60431 355 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 RPP40O75818 363 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 LGALS2P05162 132 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 HAPLN1P10915 354 aaPredicted RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 POU3F3P20264 500 aaPredicted RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 CD72P21854 359 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SLC9A3P48764 834 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 CXCL9Q07325 125 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 HYAL2Q12891 473 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SLC14A1Q13336 389 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 QPRTQ15274 297 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 PDE12Q6L8Q7 609 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 ADAMTSL2Q86TH1 951 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 OR8H1Q8NGG4 311 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 OSMRQ99650 979 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 ACAT2Q9BWD1 397 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 OLA1Q9NTK5 396 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 V9GYH0 126 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SMIM30A4D0T7 59 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 A8MUA0 341 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 LRATO95237 230 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 CDKN2CP42773 168 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 GOLGA7Q7Z5G4 137 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 SLC51BQ86UW2 128 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 NIM1KQ8IY84 436 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 OR10T2Q8NGX3 314 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 HMCESQ96FZ2 354 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 B3GNT4Q9C0J1 378 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 FAM83DQ9H4H8 585 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 IPPKQ9H8X2 491 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 RNF121Q9H920 327 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 TRMT6Q9UJA5 497 aaKnown RBP14.92□□□□□ -0.02
LMNA-201ENST00000347559 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
LMNA-201ENST00000347559 NT5C1B-RDH14C9J2C7 533 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 STX7O15400 261 aaKnown RBP14.91□□□□□ -0.02
LMNA-201ENST00000347559 GPX5O75715 221 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 MMP2P08253 660 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 TRAPPC2P0DI81 140 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 TRAPPC2BP0DI82 140 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 NUDT1P36639 197 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 PNPLA4P41247 253 aa14.91□□□□□ -0.02
LMNA-201ENST00000347559 MAGEA2P43356 314 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms