RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 EBPLQ9BY08 206 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ZDHHC5Q9C0B5 715 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 VCXQ9H320 206 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SGK2Q9HBY8 427 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SPATA6Q9NWH7 488 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SLC25A37Q9NYZ2 338 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCDHGA11Q9Y5H2 935 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TCRBV5S2A0A599 114 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 LRATO95237 230 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NPPBP16860 134 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ZNF26P17031 533 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HRH2P25021 359 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 S100A3P33764 101 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ADNP2Q6IQ32 1131 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AMZ2Q86W34 360 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MSRB3Q8IXL7 192 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR7G3Q8NG95 312 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TESCQ96BS2 214 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 RPF2Q9H7B2 306 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GPRC5BQ9NZH0 403 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DLGAP2Q9P1A6 1054 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SLC23A2Q9UGH3 650 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SCOCQ9UIL1 159 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CNOT11Q9UKZ1 510 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PPT2Q9UMR5 302 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCDHB3Q9Y5E6 796 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 BRWD1Q9NSI6 2320 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MAGEB17A8MXT2 336 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HNRNPRO43390 633 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GPIP06744 558 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 LYNP07948 512 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCSK2P16519 638 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TAP2Q03519 686 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 E2F2Q14209 437 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PGS1Q32NB8 556 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GFM2Q969S9 779 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 FCRL1Q96LA6 429 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 RIPOR3Q96MK2 946 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GDF15Q99988 308 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SGPP1Q9BX95 441 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 IKZF5Q9H5V7 419 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 COQ10BQ9H8M1 238 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ITM2CQ9NQX7 267 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MBNL1Q9NR56 388 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ASF1AQ9Y294 204 aa13.66□□□□□ -0.22
CDK5RAP1-202ENST00000346416 A6NHS1 94 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TPST1O60507 370 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCNAP12004 261 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 BMP2P12643 396 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HSD3B1P14060 373 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HSD3B2P26439 372 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NRF1Q16656 503 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CATSPEREQ5SY80 951 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GLYATQ6IB77 296 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 KIAA1211LQ6NV74 962 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PDZD3Q86UT5 571 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ANKRD46Q86W74 232 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DTWD1Q8N5C7 304 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CIB1Q99828 191 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MKRN2Q9H000 416 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 BRF2Q9HAW0 419 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SERHLQ9NQF3 203 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SLC6A13Q9NSD5 602 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MAGEL2Q9UJ55 1249 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 RAB26Q9ULW5 256 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SH2B3Q9UQQ2 575 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCM1Q15154 2024 aa13.65□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TRBV5-3A0A0A0MS03 114 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 DENRO43583 198 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 SH3BGRLO75368 114 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 ETHE1O95571 254 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 ACSM2AQ08AH3 577 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 RPA4Q13156 261 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 RUNDC3AQ59EK9 446 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 ACSM2BQ68CK6 577 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 ZNF776Q68DI1 518 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 UNC5DQ6UXZ4 953 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 LRRC56Q8IYG6 542 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 PHC3Q8NDX5 983 aa13.64□□□□□ -0.23
CDK5RAP1-202ENST00000346416 TRPV3Q8NET8 790 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms