RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 RNF44Q7L0R7 432 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 ANKMY2Q8IV38 441 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 GPATCH11Q8N954 259 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 MCOLN3Q8TDD5 553 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 ZNF480Q8WV37 535 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 DPH7Q9BTV6 452 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 ZNF71Q9NQZ8 489 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-201ENST00000344376 ACSS2Q9NR19 701 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 CUTCQ9NTM9 273 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 TAC3Q9UHF0 121 aa15.41■□□□□ 0.06
ATG4B-201ENST00000344376 A0A0J9YVX5 310 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ARGFXA6NJG6 315 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 E7ENX8 843 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 CTSVO60911 334 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 GABRB3P28472 473 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 VSX2P58304 361 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ABATP80404 500 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 NFKB2Q00653 900 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 TAP2Q03519 686 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 MGAT5Q09328 741 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 FAM214AQ32MH5 1076 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 RBM20Q5T481 1227 aaKnown RBP15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ICE2Q659A1 982 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 TRMT10BQ6PF06 316 aaKnown RBP15.4■□□□□ 0.06
ATG4B-201ENST00000344376 SYT10Q6XYQ8 523 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ATG14Q6ZNE5 492 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 FBXO36Q8NEA4 188 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ADAMTS17Q8TE56 1095 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 EEF1AKMT1Q8WVE0 214 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ZNF285Q96NJ3 590 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 IP6K3Q96PC2 410 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ZFYVE21Q9BQ24 234 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
ATG4B-201ENST00000344376 ERP44Q9BS26 406 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 PLAC1Q9HBJ0 212 aa15.4■□□□□ 0.06
ATG4B-201ENST00000344376 PTRH2Q9Y3E5 179 aaKnown RBP15.4■□□□□ 0.06
ATG4B-201ENST00000344376 OR2A25A4D2G3 310 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 DSCR3O14972 297 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 SLC16A5O15375 505 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 RRADP55042 308 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 CDKN2DP55273 166 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 PRDX1Q06830 199 aaKnown RBP15.39■□□□□ 0.05
ATG4B-201ENST00000344376 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 SLC9A5Q14940 896 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 WASHC2DQ5SRD0 308 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 FAM45BPQ6NSW5 357 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 PAQR3Q6TCH7 311 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 PTRH1Q86Y79 214 aaKnown RBP15.39■□□□□ 0.05
ATG4B-201ENST00000344376 ZBED8Q8IZ13 594 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 PPFIBP2Q8ND30 876 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 FAM45AQ8TCE6 357 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 FKBP10Q96AY3 582 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 LINGO1Q96FE5 620 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 CCDC138Q96M89 665 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 PLCD4Q9BRC7 762 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 ING2Q9H160 280 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 SLC6A20Q9NP91 592 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 ENAMQ9NRM1 1142 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 ABCF3Q9NUQ8 709 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 NSMCE4AQ9NXX6 385 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 WHRNQ9P202 907 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 SLC17A6Q9P2U8 582 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 TLK1Q9UKI8 766 aa15.39■□□□□ 0.05
ATG4B-201ENST00000344376 G3BP2Q9UN86 482 aaKnown RBP15.39■□□□□ 0.05
ATG4B-201ENST00000344376 SPTA1P02549 2419 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 FITM1A5D6W6 292 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 E7ESA3 106 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 SUV39H1O43463 412 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 RAD51CO43502 376 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 EIF2S1P05198 315 aaKnown RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HIST1H2AGP0C0S8 130 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HIST1H2ADP20671 130 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 OTX2P32243 289 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 GCGRP47871 477 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 IL2P60568 153 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 MRPS25P82663 173 aaKnown RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 SSPNQ14714 243 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HECTD2Q5U5R9 776 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 FAM69BQ5VUD6 431 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 CPZQ66K79 652 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 TCTN3Q6NUS6 607 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 ADCK2Q7Z695 626 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 OR2Y1Q8NGV0 311 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HIST1H2AHQ96KK5 128 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HIST1H2AJQ99878 128 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 H2AFJQ9BTM1 129 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 PCBD2Q9H0N5 130 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 PARVBQ9HBI1 364 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 CCDC177Q9NQR7 707 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 ANAPC2Q9UJX6 822 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 TP53TG5Q9Y2B4 290 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 VWA7Q9Y334 891 aa15.38■□□□□ 0.05
ATG4B-201ENST00000344376 UTP11Q9Y3A2 253 aaKnown RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 TLN1Q9Y490 2541 aaKnown RBP15.38■□□□□ 0.05
ATG4B-201ENST00000344376 HYKKA2RU49 373 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 PEX12O00623 359 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 TP73O15350 636 aa15.37■□□□□ 0.05
ATG4B-201ENST00000344376 KLF7O75840 302 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms