RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ISPDA4D126 451 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 MPZL2O60487 215 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 PRAMEF10O60809 474 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 ITGB1P05556 798 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 BMP2P12643 396 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 RCVRNP35243 200 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 GNG2P59768 71 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 TSTQ16762 297 aaKnown RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 UPP1Q16831 310 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 RFTN2Q52LD8 501 aaPredicted RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 RAET1GQ6H3X3 334 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 GOLGA7Q7Z5G4 137 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 TBC1D15Q8TC07 691 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 AP3S1Q92572 193 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 MED28Q9H204 178 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 WDR6Q9NNW5 1121 aaKnown RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 TMEM39AQ9NV64 488 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 AIG1Q9NVV5 245 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 GULP1Q9UBP9 304 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 H3BM21 787 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 KLHL18O94889 574 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 ELFN1P0C7U0 828 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 DNAJA1P31689 397 aaKnown RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 CLK3P49761 638 aaKnown RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 AGTR2P50052 363 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 SP3Q02447 781 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 IFI44LQ53G44 452 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 LCN1P1Q5VSP4 162 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 OR2T5Q6IEZ7 315 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 LCN8Q6JVE9 175 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 GDF6Q6KF10 455 aaPredicted RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 DUS1LQ6P1R4 473 aaKnown RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 RASSF6Q6ZTQ3 369 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 NPAS4Q8IUM7 802 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 CHCHD4Q8N4Q1 142 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 OR2T29Q8NH02 315 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 L3HYPDHQ96EM0 354 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 C11orf24Q96F05 449 aaPredicted RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 SH3YL1Q96HL8 342 aaPredicted RBP10.63□□□□□ -0.71
RPL28-201ENST00000344063 FNDC11Q9BVV2 318 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 SLC32A1Q9H598 525 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
RPL28-201ENST00000344063 FADS2P1A8MWK0 482 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 STX11O75558 287 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 POP4O95707 220 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 IFNW1P05000 195 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 SNRPD2P62316 118 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 FNDC3BQ53EP0 1204 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 USP39Q53GS9 565 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 CYP2U1Q7Z449 544 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 GHDCQ8N2G8 530 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 TUBA1CQ9BQE3 449 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CMTM6Q9NX76 183 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 ZNF451Q9Y4E5 1061 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 TMX2-CTNND1H3BSU7 103 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CCNDBP1O95273 360 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 ANXA8P13928 327 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CAPN3P20807 821 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 KCNQ1P51787 676 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CREB5Q02930 508 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CD47Q08722 323 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 C2orf80Q0P641 193 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 ZNF267Q14586 743 aaPredicted RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 FAM214AQ32MH5 1076 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 ARMC6Q6NXE6 501 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 MED27Q6P2C8 311 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 PHC2Q8IXK0 858 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DPP10Q8N608 796 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 TNKS2Q9H2K2 1166 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 PTGESO14684 152 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DFNA5O60443 496 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CREG1O75629 220 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 FDXRP22570 491 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 PPM1AP35813 382 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 MANFP55145 182 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 SPCS2Q15005 226 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 SPANXN4Q5MJ08 99 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 OR8J3Q8NGG0 315 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 USP7Q93009 1102 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DUSP26Q9BV47 211 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 POLR2J2Q9GZM3 115 aaKnown RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 ZNF282Q9UDV7 671 aaPredicted RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 ASF1AQ9Y294 204 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DNAJC15Q9Y5T4 150 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 IRGMA1A4Y4 181 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 ZBTB42B2RXF5 422 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 CLIC1O00299 241 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 KDELR3O43731 214 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DYRK3O43781 588 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 MITFO75030 526 aaPredicted RBP10.62□□□□□ -0.71
RPL28-201ENST00000344063 ZNF623O75123 536 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 DHFRP00374 187 aa10.62□□□□□ -0.71
RPL28-201ENST00000344063 PRLP01236 227 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms