RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ABHD17BQ5VST6 288 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-202ENST00000343599 H2AFVQ71UI9 128 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 KRT77Q7Z794 578 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 TRIM59Q8IWR1 403 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 NDUFAF2Q8N183 169 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 EXD3Q8N9H8 876 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 GRIN3AQ8TCU5 1115 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 PROKR1Q8TCW9 393 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 ALG3Q92685 438 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 TADA1Q96BN2 335 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 SH3YL1Q96HL8 342 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF597Q96LX8 424 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 SECISBP2Q96T21 854 aaKnown RBP7.13□□□□□ -1.27
ZNF540-202ENST00000343599 ACAT2Q9BWD1 397 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 SMOXQ9NWM0 555 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 TAS2R7Q9NYW3 318 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 TXNDC16Q9P2K2 825 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 BTRCQ9Y297 605 aa7.13□□□□□ -1.27
ZNF540-202ENST00000343599 ARHGAP42A6NI28 874 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ATP6V1G2-DDX39BF2Z307 99 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 KLF11O14901 512 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 INPP4BO15327 924 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 HDAC3O15379 428 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 PDPK1O15530 556 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 OR5F1O95221 314 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 UGT2B4P06133 528 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ELAVL4P26378 380 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ACSL1P33121 698 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 STAT5AP42229 794 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MAPK9P45984 424 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 GCGRP47871 477 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TMPRSS15P98073 1019 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SNTA1Q13424 505 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 PCOLCEQ15113 449 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SIX1Q15475 284 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 CCNG2Q16589 344 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 PXDC1Q5TGL8 231 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ZFP1Q6P2D0 407 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 FBXW8Q8N3Y1 598 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MBD6Q96DN6 1003 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TBCBQ99426 244 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 LGMNQ99538 433 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ZYG11BQ9C0D3 744 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SLC26A1Q9H2B4 701 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 AKIP1Q9NQ31 210 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 DYRK4Q9NR20 520 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 CACNG4Q9UBN1 327 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MAGED2Q9UNF1 606 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ZFR2Q9UPR6 939 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 C1orf232A0A0U1RR37 186 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 A0A1B0GUH1 482 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MASP2O00187 686 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TBL1XO60907 577 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 CPNE6O95741 557 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 DHRS4L1P0CG22 281 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 RRADP55042 308 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TMBIM6P55061 237 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 IFITM3Q01628 133 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 FOXM1Q08050 763 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TESK1Q15569 626 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 PGS1Q32NB8 556 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ZC3H12BQ5HYM0 836 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 PHF13Q86YI8 300 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 APOBEC4Q8WW27 367 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MOCOSQ96EN8 888 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 GFM1Q96RP9 751 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TUBA1CQ9BQE3 449 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 OSBPL11Q9BXB4 747 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 LRRC19Q9H756 370 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ENPP5Q9UJA9 477 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 VPS4AQ9UN37 437 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ST14Q9Y5Y6 855 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SPAG6O75602 509 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 IGSF6O95976 241 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SERPINA6P08185 405 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 SNRPAP09012 282 aaKnown RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ITGAXP20702 1163 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ADRA1DP25100 572 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 THBS2P35442 1172 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MMP12P39900 470 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 CASP3P42574 277 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MAGEA4P43358 317 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 RHAGQ02094 409 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 GALNT3Q14435 633 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 DPY19L2P1Q6NXN4 242 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 CORO6Q6QEF8 472 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 LINC00518Q8N0U6 118 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ARMC10Q8N2F6 343 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 FBXO39Q8N4B4 442 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF808Q8N4W9 903 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 NIPA2Q8N8Q9 360 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 LINC00615Q96LM1 132 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-202ENST00000343599 ULBP1Q9BZM6 244 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TRIM15Q9C019 465 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 HMG20AQ9NP66 347 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 UCKL1Q9NWZ5 548 aa7.12□□□□□ -1.27
ZNF540-202ENST00000343599 TSPAN16Q9UKR8 245 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms