RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DIRAS2Q96HU8 199 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 TBC1D17Q9HA65 648 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 SIX2Q9NPC8 291 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 CENPMQ9NSP4 180 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 FAM240BA0A1B0GVZ2 78 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 KHNYNO15037 678 aaKnown RBP14.65□□□□□ -0.06
UBE3B-202ENST00000342494 RHOP08100 348 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 IRF9Q00978 393 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 DMPKQ09013 629 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 C5orf22Q49AR2 442 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 CDCA2Q69YH5 1023 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-202ENST00000342494 SYVN1Q86TM6 617 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 GAL3ST1Q99999 423 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 CST11Q9H112 138 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 POLR2J3Q9H1A7 115 aaKnown RBP14.65□□□□□ -0.06
UBE3B-202ENST00000342494 SFXN1Q9H9B4 322 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 LGALS13Q9UHV8 139 aa14.65□□□□□ -0.06
UBE3B-202ENST00000342494 C3P01024 1663 aa14.65□□□□□ -0.07
UBE3B-202ENST00000342494 DAPL1A0PJW8 107 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 LAMTOR5O43504 91 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SRPRAP08240 638 aaKnown RBP14.64□□□□□ -0.07
UBE3B-202ENST00000342494 IL1R2P27930 398 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 RAB8AP61006 207 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 GANABQ14697 944 aaKnown RBP14.64□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM44Q2T9K0 475 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 OR2L3Q8NG85 312 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SGIP1Q9BQI5 828 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 FAM83CQ9BQN1 747 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SCGNO76038 276 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 LBX1P52954 281 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 QSOX2Q6ZRP7 698 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 GALK1P51570 392 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 RPL6Q02878 288 aaKnown RBP14.64□□□□□ -0.07
UBE3B-202ENST00000342494 CD47Q08722 323 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 ANKFN1Q8N957 763 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 ZSCAN1Q8NBB4 408 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 OR5AK3PQ8NH89 298 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SLC35F5Q8WV83 523 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 BADQ92934 168 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SMOQ99835 787 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 BCAS3Q9H6U6 928 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 TRPV5Q9NQA5 729 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SALL4Q9UJQ4 1053 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM63AO94886 807 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 NR2C1P13056 603 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 PTGIRP43119 386 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SWI5Q1ZZU3 235 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 PRRT3Q5FWE3 981 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 PLET1Q6UQ28 207 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 MR1Q95460 341 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 GRIP1Q9Y3R0 1128 aa14.64□□□□□ -0.07
UBE3B-202ENST00000342494 SPIN1Q9Y657 262 aaPredicted RBP14.64□□□□□ -0.07
UBE3B-202ENST00000342494 QPCTQ16769 361 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 PGBD2Q6P3X8 592 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CAPSLQ8WWF8 208 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 SEC61A2Q9H9S3 476 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 AP3S2P59780 193 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 DNM1P34Q6PK57 102 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 DCUN1D3Q8IWE4 304 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 PROKR2Q8NFJ6 384 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 SGCDQ92629 289 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CHCHD6Q9BRQ6 235 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 HCRTO43612 131 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 SIX3O95343 332 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 PIK3CBP42338 1070 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 TXNL4AP83876 142 aaKnown RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CBX3Q13185 183 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 KLF1Q13351 362 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 ELOAQ14241 798 aaKnown RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 ULK3Q6PHR2 472 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CMASQ8NFW8 434 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 WDR12Q9GZL7 423 aaKnown RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 FLRT1Q9NZU1 646 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 B4GALT6Q9UBX8 382 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 JUNP05412 331 aaKnown RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 HSD11B1P28845 292 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 RPS6KA3P51812 740 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CHAF1BQ13112 559 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 RIN1Q13671 783 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CRB2Q5IJ48 1285 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CLDN19Q8N6F1 224 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 BRD7Q9NPI1 651 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 BTN3A3O00478 584 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 HEXBP07686 556 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 SERINC3Q13530 473 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 KLHL22Q53GT1 634 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 C12orf76Q8N812 135 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 PNPLA2Q96AD5 504 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 PSKH2Q96QS6 385 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 MGME1Q9BQP7 344 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 MARCH7Q9H992 704 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 DKKL1Q9UK85 242 aa14.63□□□□□ -0.07
UBE3B-202ENST00000342494 WBP11Q9Y2W2 641 aaKnown RBP14.63□□□□□ -0.07
UBE3B-202ENST00000342494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-202ENST00000342494 NPIPA5E9PKD4 350 aa14.62□□□□□ -0.07
UBE3B-202ENST00000342494 SP140Q13342 867 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms