RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SLC22A18Q96BI1 424 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 CD180Q99467 661 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 PITPNM3Q9BZ71 974 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 PRM3Q9NNZ6 103 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 FGF21Q9NSA1 209 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 INTS7Q9NVH2 962 aaKnown RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 SIDT1Q9NXL6 827 aaKnown RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 CCDC88CQ9P219 2028 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 IGKV1-8A0A0C4DH67 115 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 FEZF1A0PJY2 475 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 ZNF839A8K0R7 811 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 H7BY64 318 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 TK2O00142 265 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 TLX3O43711 291 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-202ENST00000340993 PRICKLE3O43900 615 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-202ENST00000340993 CCNT2O60583 730 aaKnown RBP12.7□□□□□ -0.38
TUBD1-202ENST00000340993 KLHL2O95198 593 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 NTRK1P04629 796 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 GFAPP14136 432 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 CNTFP26441 200 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 CMPK1P30085 196 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 TGIF1Q15583 401 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 SLC5A12Q1EHB4 618 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 KLC3Q6P597 504 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 LRRC56Q8IYG6 542 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-202ENST00000340993 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 RHBDF1Q96CC6 855 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 GRAMD1AQ96CP6 724 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 PHF21BQ96EK2 531 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 PRAP1Q96NZ9 151 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 TMEM79Q9BSE2 394 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 ULBP3Q9BZM4 244 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 ASCL3Q9NQ33 180 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 XPR1Q9UBH6 696 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 SLC22A14Q9Y267 594 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 SCN2AQ99250 2005 aa12.7□□□□□ -0.38
TUBD1-202ENST00000340993 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 HAT1O14929 419 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MAP3K7O43318 606 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 CTSVO60911 334 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 KIAA0754O94854 1291 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 ENO2P09104 434 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 AP1S2P56377 157 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 EIF3IQ13347 325 aaKnown RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 ARHGAP19Q14CB8 494 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 PFKFB4Q16877 469 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 KRT71Q3SY84 523 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 DCAF12Q5T6F0 453 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 CAPN13Q6MZZ7 669 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 CACTIN-AS1Q8N1I8 211 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 METTL27Q8N6F8 245 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 OR1L3Q8NH93 324 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 STAG3L4Q8TBR4 150 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 FBXL8Q96CD0 374 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 GPR78Q96P69 363 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 OR4K3Q96R72 315 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TAAR9Q96RI9 348 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 SPRTNQ9H040 489 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 SYNPO2LQ9H987 977 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 PCDHGA8Q9Y5G5 932 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 LOC400499M0QZD8 3231 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TAPBPO15533 448 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 KERAO60938 352 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MAGEA12P43365 314 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 CSRP3P50461 194 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MC2RQ01718 297 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 RTP5Q14D33 572 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 CATSPEREQ5SY80 951 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TMEM164Q5U3C3 297 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 FRMPD2BQ6IN97 320 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 RPS27LQ71UM5 84 aaKnown RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TMPRSS11BQ86T26 416 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 THOC6Q86W42 341 aaKnown RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 C17orf64Q86WR6 236 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 PPP1R3BQ86XI6 285 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 ZNF655Q8N720 491 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MZB1Q8WU39 189 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MTBPQ96DY7 904 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 ATOH8Q96SQ7 321 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 MACROD1Q9BQ69 325 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 FANCEQ9HB96 536 aa12.69□□□□□ -0.38
TUBD1-202ENST00000340993 THSD1Q9NS62 852 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms